RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 C1QBP02746 253 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 UBCP0CG48 685 aaKnown RBP13.13□□□□□ -0.31
SCARB2-216ENST00000639300 GLI4P10075 376 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 PTHLHP12272 177 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 ETV6P41212 452 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 MAGEB1P43366 347 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 CX3CR1P49238 355 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 ARG2P78540 354 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 PMPCAQ10713 525 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
SCARB2-216ENST00000639300 BTN1A1Q13410 526 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 CD276Q5ZPR3 534 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 RHOUQ7L0Q8 258 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 UBE3DQ7Z6J8 389 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 CCDC71LQ8N9Z2 235 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 CLEC1AQ8NC01 280 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 MAFIPQ8WZ33 124 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 SIGLEC11Q96RL6 698 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 SAV1Q9H4B6 383 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-216ENST00000639300 ZNF638Q14966 1978 aaKnown RBP13.13□□□□□ -0.31
SCARB2-216ENST00000639300 LOC102725191A0A1B0GVB3 256 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 HSPB6O14558 160 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 CCSO14618 274 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 SSX4O60224 188 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 PMP2P02689 132 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 EPXP11678 715 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 PTBP1P26599 531 aaKnown RBP eCLIP13.13□□□□□ -0.31
SCARB2-216ENST00000639300 ATP1B3P54709 279 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 CMTM1Q8IZ96 169 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 FAM71CQ8NEG0 241 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 UBE2ZQ9H832 354 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-216ENST00000639300 FKRPQ9H9S5 495 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 SLC52A3Q9NQ40 469 aa13.13□□□□□ -0.31
SCARB2-216ENST00000639300 AIPO00170 330 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 SULT1B1O43704 296 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 FADS1O60427 444 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 NKX2-2O95096 273 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 EML2O95834 649 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 SRFP11831 508 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 TPT1P13693 172 aaKnown RBP13.12□□□□□ -0.31
SCARB2-216ENST00000639300 ZNF14P17017 642 aaPredicted RBP13.12□□□□□ -0.31
SCARB2-216ENST00000639300 CNN3Q15417 329 aaKnown RBP13.12□□□□□ -0.31
SCARB2-216ENST00000639300 TMEM201Q5SNT2 666 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 ADGRE4PQ86SQ3 457 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 OR2G2Q8NGZ5 317 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 ATF6BQ99941 703 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 CT62P0C5K7 136 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 GABRB1P18505 474 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 IL32P24001 234 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 APLNRP35414 380 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 NPY4RP50391 375 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 MAP2K6P52564 334 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 EFNA3P52797 238 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 BDH1Q02338 343 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 KRBOX4Q5JUW0 171 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 CLVS2Q5SYC1 327 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 TMPRSS11FQ6ZWK6 438 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 BATF2Q8N1L9 274 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 TEX19Q8NA77 164 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 LAT2Q9GZY6 243 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 CDCP1Q9H5V8 836 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 KCNIP1Q9NZI2 227 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 A0A0B4J2A0 478 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 CER1O95813 267 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 ZFP36L2P47974 494 aaKnown RBP13.12□□□□□ -0.31
SCARB2-216ENST00000639300 GZMMP51124 257 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 CNEP1R1Q8N9A8 125 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 KTI12Q96EK9 354 aaPredicted RBP13.12□□□□□ -0.31
SCARB2-216ENST00000639300 SHPKQ9UHJ6 478 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 A0A0A6YYJ9 748 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 SMCO3A2RU48 225 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 LMO7DNF2Z398 122 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 BET1O15155 118 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 TRAPPC2P0DI81 140 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 TRAPPC2BP0DI82 140 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 DCTDP32321 178 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 ZNF425Q6IV72 752 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 UNQ6126/PRO20091Q6UXV3 157 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 NPSR1Q6W5P4 371 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 STAC2Q6ZMT1 411 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 TDHQ8IZJ6 230 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 OR51E1Q8TCB6 317 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 WIF1Q9Y5W5 379 aa13.12□□□□□ -0.31
SCARB2-216ENST00000639300 ZNF831Q5JPB2 1677 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 A0A087WUJ7 227 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 STK17BO94768 372 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 EIF1P41567 113 aaKnown RBP13.11□□□□□ -0.31
SCARB2-216ENST00000639300 GZMKP49863 264 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 C21orf58P58505 322 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 DCAF12Q5T6F0 453 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 CPT1CQ8TCG5 803 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 VRK1Q99986 396 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-216ENST00000639300 ZNF649Q9BS31 505 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 SLC19A3Q9BZV2 496 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 METTL9Q9H1A3 318 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 ANKRD33BA6NCL7 494 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 DDAH2O95865 285 aa13.11□□□□□ -0.31
SCARB2-216ENST00000639300 RAF1P04049 648 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms