RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 NCK1P16333 377 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CD27P26842 260 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MMP16P51512 607 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ID2Q02363 134 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TBC1D3CQ6IPX1 549 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 LAPTM4BQ86VI4 370 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TBC1D3Q8IZP1 549 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CFAP52Q8N1V2 620 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CANT1Q8WVQ1 401 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 IL22RA2Q969J5 263 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TIMP4Q99727 224 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 C1orf198Q9H425 327 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 PRODH2Q9UF12 536 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 UGGT1Q9NYU2 1555 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 KDM3BQ7LBC6 1761 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 UBE2QL1A1L167 161 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 LRATO95237 230 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ISG15P05161 165 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 RAB40ALP0C0E4 278 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR5G3P0C626 314 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 HMGCS2P54868 508 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 HSD11B2P80365 405 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SRSF2Q01130 221 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 HYAL1Q12794 435 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 JOSD1Q15040 202 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 GABRA6Q16445 453 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CSNK1A1LQ8N752 337 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR5M3Q8NGP4 307 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR6N2Q8NGY6 317 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MFSD8Q8NHS3 518 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 LNX1Q8TBB1 728 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TLNRD1Q9H1K6 362 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 FGF21Q9NSA1 209 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 FKBPLQ9UIM3 349 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 HSPB8Q9UJY1 196 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR51B2Q9Y5P1 312 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 hCG_38984A0A1B0GV85 526 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 C19orf67A6NJJ6 358 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 HMGB3O15347 200 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ELAVL4P26378 380 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 PSMB5P28074 263 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CCKARP32238 428 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 BSGP35613 385 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SLC36A1Q7Z2H8 476 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MDGA1Q8NFP4 955 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM18Q96B42 140 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 GPR78Q96P69 363 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TAF9BQ9HBM6 251 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 BET1LQ9NYM9 111 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 B3GAT1Q9P2W7 334 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 NXT1Q9UKK6 140 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 FZD4Q9ULV1 537 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 NEU3Q9UQ49 428 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CEP290O15078 2479 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ANKRD17O75179 2603 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 HRKO00198 91 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 NCR1O76036 304 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MPC2O95563 127 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 GLP2RO95838 553 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ABHD16AO95870 558 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ACHEP22303 614 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF84P51523 738 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TCEAL5Q5H9L2 206 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 LRRTM1Q86UE6 522 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR4D5Q8NGN0 318 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR9G4Q8NGQ1 327 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 FAM46AQ96IP4 442 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 PPP1R3EQ9H7J1 279 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SEMA5BQ9P283 1151 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF337Q9Y3M9 751 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MEIKINA0A087WXM9 373 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 PPIHO43447 177 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 PRAF2O60831 178 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SLC25A12O75746 678 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TOXO94900 526 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CTBP2P56545 445 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 KHDC3LQ587J8 217 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 C6orf136Q5SQH8 315 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 BCL2L15Q5TBC7 163 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 DET1Q7L5Y6 550 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TTC9BQ8N6N2 239 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 C19orf47Q8N9M1 422 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 INO80EQ8NBZ0 244 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 TFGQ92734 400 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 JSRP1Q96MG2 331 aaPredicted RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SRD5A3Q9H8P0 318 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MOB1AQ9H8S9 216 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 RAB9BQ9NP90 201 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SPANXCQ9NY87 97 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR6C3Q9NZP0 311 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 NUP153P49790 1475 aaKnown RBP3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ESDP10768 282 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 OR3A4PP47883 348 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 CXADRP78310 365 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ADNP2Q6IQ32 1131 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 SLC7A13Q8TCU3 470 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ST6GALNAC6Q969X2 333 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 MS4A4EQ96PG1 132 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 ACOX2Q99424 681 aa3.93□□□□□ -1.78
SCN3A-209ENST00000639244 PAAF1Q9BRP4 392 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms