RNA–Protein interactions for RNA: ENST00000636652.1

CHRNA4-216, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 195 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-216ENST00000636652 ITLN2Q8WWU7 325 aaPredicted RBP11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 RNFT2Q96EX2 444 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 LRRC46Q96FV0 321 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF462Q96JM2 2506 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 INTS14Q96SY0 518 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 WACQ9BTA9 647 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 ADGRL4Q9HBW9 690 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 MRPS18AQ9NVS2 196 aaKnown RBP11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 PCDHGB5Q9Y5G0 923 aa11.73□□□□□ -0.53
CHRNA4-216ENST00000636652 SMG1Q96Q15 3661 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 EFCAB10A6NFE3 127 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 FAM20BO75063 409 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 RAD51DO75771 328 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 MPZL1O95297 269 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 SCG5P05408 212 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 CST2P09228 141 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 SBK2P0C263 348 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 PIPP12273 146 aaPredicted RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 PLA2G2AP14555 144 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 IL32P24001 234 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 ATP6V1E1P36543 226 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 SLC15A1P46059 708 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 ENTPD1P49961 510 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 ADAM8P78325 824 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 RAB40BQ12829 278 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 GABRA6Q16445 453 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 SGCAQ16586 387 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 PCK2Q16822 640 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 TBRG1Q3YBR2 411 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 TEX30Q5JUR7 227 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 RBM48Q5RL73 367 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 C1QTNF12Q5T7M4 302 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 LYPD4Q6UWN0 246 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 STAC2Q6ZMT1 411 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 BHLHA15Q7RTS1 189 aaPredicted RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 SLC16A9Q7RTY1 509 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 ERI1Q8IV48 349 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF786Q8N393 782 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 BPIFB6Q8NFQ5 453 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 STEAP2Q8NFT2 490 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 RNASE6Q93091 150 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 YIPF3Q9GZM5 350 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 OR10A4Q9H209 315 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 WDR76Q9H967 626 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 AMBNQ9NP70 447 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 EMC7Q9NPA0 242 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 KCNJ16Q9NPI9 418 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 SCN3BQ9NY72 215 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 CNOT2Q9NZN8 540 aaKnown RBP11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 PSORS1C1Q9UIG5 152 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 BLOC1S6Q9UL45 172 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 POLR1DQ9Y2S0 133 aa11.72□□□□□ -0.53
CHRNA4-216ENST00000636652 ESPL1Q14674 2120 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 A0A096LPE4 126 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 A0A1W2PPZ6 126 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 C12orf71A8MTZ7 269 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 XPNPEP2O43895 674 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 SELENOFO60613 162 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 TMCC2O75069 709 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 CLDN14O95500 239 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 MRPL3P09001 348 aaKnown RBP11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 HOXC12P31275 282 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 NAA10P41227 235 aaPredicted RBP11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 PCBD1P61457 104 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 ENDOGQ14249 297 aaKnown RBP11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 MEP1BQ16820 701 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 KLHL22Q53GT1 634 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 UGT2A3Q6UWM9 527 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 SHFQ7M4L6 423 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 SYT9Q86SS6 491 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 SKA3Q8IX90 412 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 OR51G2Q8NGK0 314 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 OR6N2Q8NGY6 317 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 NANOS1Q8WY41 292 aaKnown RBP11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 HTRA1Q92743 480 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 LGALS12Q96DT0 336 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 MNTQ99583 582 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 ZNF416Q9BWM5 594 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 YTHDF1Q9BYJ9 559 aaKnown RBP11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 KCNN2Q9H2S1 579 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 OBP2BQ9NPH6 170 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 EXOGQ9Y2C4 368 aaKnown RBP11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 PCDHGB1Q9Y5G3 927 aa11.71□□□□□ -0.53
CHRNA4-216ENST00000636652 NBASA2RRP1 2371 aa11.71□□□□□ -0.54
CHRNA4-216ENST00000636652 ARPC4-TTLL3A0A0A6YYG9 625 aa11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 NKX2-6A6NCS4 301 aa11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 OR5H1A6NKK0 313 aa11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 C16orf97H3BN30 126 aa11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 PYCARD-AS1I3L0S3 204 aa11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 J3QKU1 62 aa11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 ZNF593O00488 134 aaPredicted RBP11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 UBL3O95164 117 aa11.7□□□□□ -0.54
CHRNA4-216ENST00000636652 FADS2O95864 444 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms