RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ST8SIA4Q92187 359 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 BCL2L2Q92843 193 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF764Q96H86 408 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM231Q9H6L2 316 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 MYOZ1Q9NP98 299 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 RNF150Q9ULK6 438 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM72A0PK05 275 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 SH3BP2P78314 561 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 C18orf21Q32NC0 220 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 LETMD1Q6P1Q0 360 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 GPR32P1Q8NGA4 272 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 KLF16Q9BXK1 252 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 SIX2Q9NPC8 291 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 ZDHHC18Q9NUE0 388 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 THYN1Q9P016 225 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 CIDEAO60543 219 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 CNMDO75829 334 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 SLCO2B1O94956 709 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 AIFM1O95831 613 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 IGHV3-9P01782 118 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 OR8G3PP0DMU2 310 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 HSD17B1P14061 328 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 SOX18P35713 384 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 RBP2P50120 134 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 EXOSC2Q13868 293 aaKnown RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 THEM4Q5T1C6 240 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 OR4Q3Q8NH05 313 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 SFT2D1Q8WV19 159 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 KCTD12Q96CX2 325 aaKnown RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 JAM3Q9BX67 310 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 NRIP3Q9NQ35 241 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 CNOT2Q9NZN8 540 aaKnown RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 IDSB3KWA1 339 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 PPP5D1E7EU14 171 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 VAMP5O95183 116 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 POU3F3P20264 500 aaPredicted RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 RFX2P48378 723 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 TP53INP2Q8IXH6 220 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 SLC39A11Q8N1S5 342 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 ARFGAP1Q8N6T3 406 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 OR10P1Q8NGE3 313 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 OR13C5Q8NGS8 318 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 OR13C2Q8NGS9 318 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 MACROD1Q9BQ69 325 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 SORBS1Q9BX66 1292 aaKnown RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 TXLNGYQ9BZA5 131 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 LIN28AQ9H9Z2 209 aaKnown RBP5.11□□□□□ -1.59
SCN1A-209ENST00000635750 RP1P56715 2156 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 KNTC1P50748 2209 aa5.11□□□□□ -1.59
SCN1A-209ENST00000635750 P2RY10O00398 339 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SFTPCP11686 197 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PIPP12273 146 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TBXA2RP21731 343 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PCMT1P22061 227 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CA5AP35218 305 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 EVX2Q03828 476 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CDK5R2Q13319 367 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NKAIN1Q4KMZ8 207 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 MARCH8Q5T0T0 291 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 RBPMS2Q6ZRY4 209 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DOK3Q7L591 496 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SPRED1Q7Z699 444 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 DTWD2Q8NBA8 298 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM40Q8WWA1 233 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 STACQ99469 402 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ARRDC1-AS1Q9H2J1 176 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PTTG3PQ9NZH4 202 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 VAPAQ9P0L0 249 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SLC23A1Q9UHI7 598 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NAGKQ9UJ70 344 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NFAT5O94916 1531 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SLC22A20A6NK97 555 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 M0QZQ0 153 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 GABRPO00591 440 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NTF3P20783 257 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CSNK1DP48730 415 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PRRX1P54821 245 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SNRPGP62308 76 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PAFAH1B2P68402 229 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 MLLT11Q13015 90 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 IHHQ14623 411 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CLLU1OSQ5K130 101 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SPNS3Q6ZMD2 512 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ADGRE4PQ86SQ3 457 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 YRDCQ86U90 279 aaKnown RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM135Q86UB9 458 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 LRRC56Q8IYG6 542 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NUP37Q8NFH4 326 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 OR2G3Q8NGZ4 309 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 MAFAQ8NHW3 353 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 YIPF5Q969M3 257 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 CCDC74AQ96AQ1 378 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 TMEM147Q9BVK8 224 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 GAB2Q9UQC2 676 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 NFS1Q9Y697 457 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF142P52746 1687 aaPredicted RBP5.1□□□□□ -1.59
SCN1A-209ENST00000635750 WNT7AO00755 349 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PIAS2O75928 621 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 SLC6A11P48066 632 aa5.1□□□□□ -1.59
SCN1A-209ENST00000635750 PXDC1Q5TGL8 231 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms