RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 GRID2IPA4D2P6 1211 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 CCDC182A6NF36 153 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 B4DGG1 531 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 FAM90A26D6RGX4 464 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 ZNF195O14628 629 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 PRKYO43930 277 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 SOX30O94993 753 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 KRT75O95678 551 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 PCCAP05165 728 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 KLK3P07288 261 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 FBP1P09467 338 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 H2BFMP0C1H6 154 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 GATA1P15976 413 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 TCP1P17987 556 aaKnown RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 GZMHP20718 246 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 IMPDH1P20839 514 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 PSMA1P25786 263 aaKnown RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 CHATP28329 748 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 CTGFP29279 349 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 MLLT10P55197 1068 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 SNAP25P60880 206 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 RPL32P62910 135 aaKnown RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 HGFACQ04756 655 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 MFGE8Q08431 387 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 ASAH1Q13510 395 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 FAM131AQ6UXB0 335 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 DCDC5Q6ZRR9 648 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 LRRC55Q6ZSA7 311 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 PRUNE1Q86TP1 453 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 TMEM130Q8N3G9 435 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 IL17DQ8TAD2 202 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 SYNPRQ8TBG9 265 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 SFRP2Q96HF1 295 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 YIPF3Q9GZM5 350 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 FAM234AQ9H0X4 552 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 C6orf50Q9HD87 102 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 SLC25A37Q9NYZ2 338 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 POMT2Q9UKY4 750 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 RCL1Q9Y2P8 373 aaKnown RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 SNX24Q9Y343 169 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 HEMK1Q9Y5R4 338 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-213ENST00000630925 FER1L6Q2WGJ9 1857 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 NFAT5O94916 1531 aa4.27□□□□□ -1.73
SDCBP-213ENST00000630925 LAMA2P24043 3122 aaKnown RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 A0A096LPK6 155 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 FAM74A7A6NL05 159 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 PROB1E7EW31 1015 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 KPNA4O00629 521 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TXNDC9O14530 226 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 MPZL2O60487 215 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 LRATO95237 230 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 C1orf105O95561 183 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 PRKCGP05129 697 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 BCHEP06276 602 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 RHOCP08134 193 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TFPIP10646 304 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 HTR1FP30939 366 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 ARR3P36575 388 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 BDKRB1P46663 353 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 BRCC3P46736 316 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CCR6P51684 374 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 AP2S1P53680 142 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CLDN20P56880 219 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 VSX2P58304 361 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 GNG2P59768 71 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 OSTNP61366 133 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 HMGCS1Q01581 520 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 GPR17Q13304 367 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 CEACAM7Q14002 265 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TAL2Q16559 108 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 UPP1Q16831 310 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TMEM52BQ4KMG9 183 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 FAM74A3Q4VXF1 159 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 RAB6CQ53S08 254 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 ZNF774Q6NX45 483 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 RBM44Q6ZP01 1051 aaKnown RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SLC25A48Q6ZT89 311 aaKnown RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 LANCL3Q6ZV70 420 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 MTURNQ8N3F0 131 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 ATP6V1C2Q8NEY4 427 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 XAGE5Q8WWM1 108 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 C11orf40Q8WZ69 217 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 OTULINQ96BN8 352 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 PDXPQ96GD0 296 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 PFDN5Q99471 154 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 RAB6CQ9H0N0 254 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SEMA6AQ9H2E6 1030 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 WDR41Q9HAD4 459 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 TMBIM4Q9HC24 238 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 GKN1Q9NS71 199 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 FLRT3Q9NZU0 649 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 GSKIPQ9P0R6 139 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 PLEKHB1Q9UF11 243 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-213ENST00000630925 SAR1BQ9Y6B6 198 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 EVPLQ92817 2033 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 A0A0B4J2E0 115 aa4.26□□□□□ -1.73
SDCBP-213ENST00000630925 GLYATL1P3A0A0U1RQE8 302 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms