RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TUBA1AQ71U36 451 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 GLB1L2Q8IW92 636 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 GALNT4Q8N4A0 578 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 PACRGLQ8N7B6 248 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 WDR31Q8NA23 367 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 PROKR2Q8NFJ6 384 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 OR9Q1Q8NGQ5 310 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 OR2T4Q8NH00 348 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 FOXN4Q96NZ1 517 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 KCNN2Q9H2S1 579 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 VCXQ9H320 206 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 TOR3AQ9H497 397 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 SRA1Q9HD15 236 aaKnown RBP12.85□□□□□ -0.35
PNKP-221ENST00000627317 TVP23BQ9NYZ1 205 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 COA3Q9Y2R0 106 aaPredicted RBP12.85□□□□□ -0.35
PNKP-221ENST00000627317 FKBP7Q9Y680 259 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 VPS13CQ709C8 3753 aa12.85□□□□□ -0.35
PNKP-221ENST00000627317 NF1P21359 2839 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 MTORP42345 2549 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 IGLV1-36A0A0B4J1U3 117 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 PRR23D1E9PI22 279 aaPredicted RBP12.84□□□□□ -0.35
PNKP-221ENST00000627317 DCTN6O00399 190 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 MGRN1O60291 552 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 HLA-HP01893 362 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 PRR23D2P0DMB1 279 aaPredicted RBP12.84□□□□□ -0.35
PNKP-221ENST00000627317 MSR1P21757 451 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 LAP3P28838 519 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 PYCR1P32322 319 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 POLR2IP36954 125 aaKnown RBP12.84□□□□□ -0.35
PNKP-221ENST00000627317 ZNF83P51522 516 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 SLC25A1P53007 311 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 GLO1Q04760 184 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 ZNF362Q5T0B9 420 aaPredicted RBP12.84□□□□□ -0.35
PNKP-221ENST00000627317 OGFRL1Q5TC84 451 aaPredicted RBP12.84□□□□□ -0.35
PNKP-221ENST00000627317 C12orf73Q69YU5 71 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 FOXL2NBQ6ZUU3 175 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 SLC16A14Q7RTX9 510 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 DPPA2Q7Z7J5 298 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 OR6V1Q8N148 313 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 LRRC18Q8N456 261 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 NABP1Q96AH0 204 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 RDH12Q96NR8 316 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 SH3GL3Q99963 347 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 MED20Q9H944 212 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 SIAEQ9HAT2 523 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 MOV10Q9HCE1 1003 aaKnown RBP12.84□□□□□ -0.35
PNKP-221ENST00000627317 POLE4Q9NR33 117 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 SMPD3Q9NY59 655 aaPredicted RBP12.84□□□□□ -0.35
PNKP-221ENST00000627317 ITGB1BP2Q9UKP3 347 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 B9D1Q9UPM9 204 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 POLR1DQ9Y2S0 133 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 PRR14LQ5THK1 2151 aa12.84□□□□□ -0.35
PNKP-221ENST00000627317 ZNF469Q96JG9 3925 aaPredicted RBP12.83□□□□□ -0.35
PNKP-221ENST00000627317 FAM183AA6NL82 134 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 FAM171A2A8MVW0 826 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 M0R129 80 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 UBL3O95164 117 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 ATE1O95260 518 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 SNAP29O95721 258 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 HLA-DQA2P01906 255 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 GYPBP06028 91 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 SPI1P17947 270 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 PAX7P23759 505 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 CDC42P60953 191 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 DBPQ10586 325 aaPredicted RBP12.83□□□□□ -0.36
PNKP-221ENST00000627317 SLC36A2Q495M3 483 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 BEX5Q5H9J7 111 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 FBXW10Q5XX13 1052 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 TMEM53Q6P2H8 277 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 PLBD1Q6P4A8 553 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.83□□□□□ -0.36
PNKP-221ENST00000627317 ZBTB46Q86UZ6 589 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 MDP1Q86V88 176 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 SKA3Q8IX90 412 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 OR10H5Q8NGA6 315 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 OR6K6Q8NGW6 343 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 MBD6Q96DN6 1003 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 HS3ST6Q96QI5 342 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 MBOAT4Q96T53 435 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 DDOQ99489 341 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 FOXC2Q99958 501 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 C1QTNF6Q9BXI9 259 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 NMNAT2Q9BZQ4 307 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 EMC7Q9NPA0 242 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 CCNB1IP1Q9NPC3 277 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 IMPAD1Q9NX62 359 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 PLEKHA6Q9Y2H5 1048 aa12.83□□□□□ -0.36
PNKP-221ENST00000627317 C12orf71A8MTZ7 269 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 M0R1B8 84 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 ATP6V1G2O95670 118 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 RAB36O95755 333 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 GPANK1O95872 356 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 GAAP10253 952 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 NR1H2P55055 460 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 PIGFQ07326 219 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 RIPK1Q13546 671 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 GSG1Q2KHT4 349 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 FAM27BQ5VT28 67 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 SEZ6L2Q6UXD5 910 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 CXXC5Q7LFL8 322 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms