RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CD74P04233 296 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 BEX5Q5H9J7 111 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM225Q6GV28 225 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 SLC35D2Q76EJ3 337 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 OR13C8Q8NGS7 320 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 GAL3ST1Q99999 423 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 KLHDC3Q9BQ90 382 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF471Q9BX82 626 aaPredicted RBP17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 FAM117AQ9C073 453 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 OR10A5Q9H207 317 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 A0A0A6YYC8 382 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 I3L1I5 382 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 APBB3O95704 486 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 PBX2P40425 430 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 BTG2P78543 158 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 ERV3-1Q14264 604 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 LRRC37A5PQ49AS3 106 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 ZSCAN1Q8NBB4 408 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 NARS2Q96I59 477 aaKnown RBP17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 DGAT2Q96PD7 388 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 SAV1Q9H4B6 383 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 NOP16Q9Y3C1 178 aaKnown RBP17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 DOCK8Q8NF50 2099 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 PCP4L1A6NKN8 68 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 DLSTP36957 453 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 TAF13Q15543 124 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM196Q5HYL7 178 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 BPIFB2Q8N4F0 458 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 PHOSPHO1Q8TCT1 267 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 ASB12Q8WXK4 309 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 TAAR8Q969N4 342 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 SLC6A7Q99884 636 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 CPNE7Q9UBL6 633 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 MSRAQ9UJ68 235 aa17.65■□□□□ 0.42
PDLIM3-212ENST00000620787 A0A1W2PPC1 479 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 CYB5AP00167 134 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 H2AFB1P0C5Y9 115 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 RNH1P13489 461 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF28P17035 718 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 HTR2CP28335 458 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ATP1B3P54709 279 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 FUT7Q11130 342 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 SNTB1Q13884 538 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ALG11Q2TAA5 492 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 TEX30Q5JUR7 227 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ACOT7LQ6ZUV0 252 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF615Q8N8J6 731 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 RNF128Q8TEB7 428 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 SEC22AQ96IW7 307 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 FOXN4Q96NZ1 517 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 PDCD10Q9BUL8 212 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 PIGMQ9H3S5 423 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 COMMD9Q9P000 198 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 KLK13Q9UKR3 277 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 GTF2A1LQ9UNN4 478 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 VSIG4Q9Y279 399 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF736B4DX44 427 aaPredicted RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 SLC25A12O75746 678 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ATG12O94817 140 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 HLA-AP01891 365 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 GDI1P31150 447 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 MFGE8Q08431 387 aaPredicted RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 PAN3Q58A45 887 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 VWA2Q5GFL6 755 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 GLYATL3Q5SZD4 288 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 YAF2Q8IY57 180 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 BOLLQ8N9W6 283 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 FAM174AQ8TBP5 190 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 PPP1R1CQ8WVI7 109 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 ASB5Q8WWX0 329 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 SLCO5A1Q9H2Y9 848 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 PRTFDC1Q9NRG1 225 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 TAS2R4Q9NYW5 299 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 CGGBP1Q9UFW8 167 aaPredicted RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 DHDHQ9UQ10 334 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 KCNK7Q9Y2U2 307 aa17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 MRPS18BQ9Y676 258 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-212ENST00000620787 USP34Q70CQ2 3546 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 CLPSP04118 112 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 LIPCP11150 499 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 IGFBP3P17936 291 aaPredicted RBP17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 COL9A1P20849 921 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 CCINQ13939 588 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 ATXN7L3Q14CW9 347 aaPredicted RBP17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 MOGAT2Q3SYC2 334 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 SCGB2B2Q4G0G5 96 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 LIN54Q6MZP7 749 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 UQCC3Q6UW78 93 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 MED25Q71SY5 747 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 NDUFAF7Q7L592 441 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 TAF8Q7Z7C8 310 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 CCDC36Q8IYA8 594 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF679Q8IYX0 411 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 OR1S2Q8NGQ3 325 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 ZBTB8AQ96BR9 441 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 ZMAT3Q9HA38 289 aaKnown RBP17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 PRMT8Q9NR22 394 aaPredicted RBP17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 PCDHB10Q9UN67 800 aa17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 FARSAQ9Y285 508 aaKnown RBP17.63■□□□□ 0.41
PDLIM3-212ENST00000620787 KIF26BQ2KJY2 2108 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms