RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 ADARB1P78563 741 aaKnown RBP17.22■□□□□ 0.35
UPF3A-211ENST00000618700 GLO1Q04760 184 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 KEAP1Q14145 624 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 KCNMB1Q16558 191 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 LINC01590Q5TEZ4 76 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 FAM27BQ5VT28 67 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 SSX8Q7RTT4 187 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 SKA3Q8IX90 412 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 BBS1Q8NFJ9 593 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 SLC26A10Q8NG04 563 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 OR52N5Q8NH56 324 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 SH3GL3Q99963 347 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 SEC61A2Q9H9S3 476 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 CRIM1Q9NZV1 1036 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 GMPPBQ9Y5P6 360 aa17.22■□□□□ 0.35
UPF3A-211ENST00000618700 PRR14LQ5THK1 2151 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 A0A1W2PR80 420 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 FAM171A2A8MVW0 826 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 PRODHO43272 600 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 TLX2O43763 284 aaPredicted RBP17.21■□□□□ 0.35
UPF3A-211ENST00000618700 MPZL1O95297 269 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 FARS2O95363 451 aaKnown RBP17.21■□□□□ 0.35
UPF3A-211ENST00000618700 GPANK1O95872 356 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 SLC2A5P22732 501 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 AQP4P55087 323 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 UBE2NP61088 152 aaKnown RBP17.21■□□□□ 0.35
UPF3A-211ENST00000618700 TUBA1BP68363 451 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 TUBA4AP68366 448 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 HSF2Q03933 536 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 ENDOGQ14249 297 aaKnown RBP17.21■□□□□ 0.35
UPF3A-211ENST00000618700 PPA1Q15181 289 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 SGCAQ16586 387 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 AADACL4Q5VUY2 407 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 TUBA1AQ71U36 451 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 OR51L1Q8NGJ5 315 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 OR8J1Q8NGP2 316 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 FAM222BQ8WU58 562 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 C11orf40Q8WZ69 217 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 OTULINQ96BN8 352 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 MUCL1Q96DR8 90 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 IL4I1Q96RQ9 567 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 ADI1Q9BV57 179 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 IMPAD1Q9NX62 359 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 B3GNT2Q9NY97 397 aa17.21■□□□□ 0.35
UPF3A-211ENST00000618700 PLEKHB1Q9UF11 243 aaPredicted RBP17.21■□□□□ 0.35
UPF3A-211ENST00000618700 WNT11O96014 354 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 HLA-HP01893 362 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 TFP02787 698 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 HRGP04196 525 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 CST2P09228 141 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 GUCA1AP43080 201 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-211ENST00000618700 TTC23Q5W5X9 447 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 SP5Q6BEB4 398 aaPredicted RBP17.2■□□□□ 0.34
UPF3A-211ENST00000618700 UGT2A3Q6UWM9 527 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 LYPD4Q6UWN0 246 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 DHRSXQ8N5I4 330 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF555Q8NEP9 628 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 FGFBP3Q8TAT2 258 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 TRUB1Q8WWH5 349 aaKnown RBP17.2■□□□□ 0.34
UPF3A-211ENST00000618700 CYGBQ8WWM9 190 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 NANOS1Q8WY41 292 aaKnown RBP17.2■□□□□ 0.34
UPF3A-211ENST00000618700 NOX3Q9HBY0 568 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 EMC7Q9NPA0 242 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 MRPL22Q9NWU5 206 aaKnown RBP17.2■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF226Q9NYT6 803 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 NPAP1Q9NZP6 1156 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 MOKQ9UQ07 419 aa17.2■□□□□ 0.34
UPF3A-211ENST00000618700 FLNBO75369 2602 aaKnown RBP17.2■□□□□ 0.34
UPF3A-211ENST00000618700 CCDC182A6NF36 153 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 H0YAE9 185 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 GLCEO94923 617 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 UBL3O95164 117 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 MMP7P09237 267 aaPredicted RBP17.19■□□□□ 0.34
UPF3A-211ENST00000618700 EPXP11678 715 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 GABRB1P18505 474 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 CRYGSP22914 178 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 CAPGP40121 348 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 CENPAP49450 140 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 SNRPGP62308 76 aaKnown RBP17.19■□□□□ 0.34
UPF3A-211ENST00000618700 LSM6P62312 80 aaKnown RBP17.19■□□□□ 0.34
UPF3A-211ENST00000618700 MEP1BQ16820 701 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 SLC35D3Q5M8T2 416 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 NXNL2Q5VZ03 156 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 SLC16A14Q7RTX9 510 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 BCDIN3DQ7Z5W3 292 aaKnown RBP17.19■□□□□ 0.34
UPF3A-211ENST00000618700 DPPA2Q7Z7J5 298 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 ENTHD1Q8IYW4 607 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 DEPDC4Q8N2C3 294 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 LRRC18Q8N456 261 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 FAM169BQ8N8A8 192 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 UBE2FQ969M7 185 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 ZC3HAV1LQ96H79 300 aaKnown RBP17.19■□□□□ 0.34
UPF3A-211ENST00000618700 ZNF416Q9BWM5 594 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 OR51V1Q9H2C8 321 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 MOV10Q9HCE1 1003 aaKnown RBP17.19■□□□□ 0.34
UPF3A-211ENST00000618700 CRNNQ9UBG3 495 aaPredicted RBP17.19■□□□□ 0.34
UPF3A-211ENST00000618700 COMMD3-BMI1R4GMX3 469 aa17.19■□□□□ 0.34
UPF3A-211ENST00000618700 PAX7P23759 505 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 FMO3P31513 532 aa17.18■□□□□ 0.34
UPF3A-211ENST00000618700 VHLP40337 213 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms