RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ENPP7Q6UWV6 458 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 GALNTL5Q7Z4T8 443 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 VN1R4Q7Z5H5 301 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 ETFBKMTQ8IXQ9 262 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 POMGNT2Q8NAT1 580 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 CNTNAP3BQ96NU0 1288 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 DEC1Q9P2X7 70 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 CHRNA9Q9UGM1 479 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 MSRAQ9UJ68 235 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 TMED7Q9Y3B3 224 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 EYSQ5T1H1 3165 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 EIF1AYO14602 144 aaKnown RBP11.94□□□□□ -0.5
MSH6-214ENST00000616033 ZNF208O43345 1280 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 EML2O95834 649 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 TACSTD2P09758 323 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 NME2P22392 152 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 AGTR1P30556 359 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 CTNNB1P35222 781 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 DGAT2L6Q6ZPD8 337 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 SLC29A4Q7RTT9 530 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 C12orf76Q8N812 135 aaPredicted RBP11.94□□□□□ -0.5
MSH6-214ENST00000616033 LINC00615Q96LM1 132 aaPredicted RBP11.94□□□□□ -0.5
MSH6-214ENST00000616033 POTEKPQ9BYX7 375 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 KCNG2Q9UJ96 466 aa11.94□□□□□ -0.5
MSH6-214ENST00000616033 A0A0D9SG52 128 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 NUDT14O95848 222 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 CSTAP01040 98 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 PLAURQ03405 335 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 PPP1R1AQ13522 171 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 IL10RAQ13651 578 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 RAB11BQ15907 218 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 EIF2S3LQ2VIR3 472 aaKnown RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 MOGAT2Q3SYC2 334 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 ATPAF1Q5TC12 328 aaPredicted RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 FAM109BQ6ICB4 259 aaPredicted RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 CNKSR3Q6P9H4 555 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 MARCH3Q86UD3 253 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 SPACA7Q96KW9 195 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 PIGMQ9H3S5 423 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 LRIT1Q9P2V4 623 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 URB1O60287 2271 aaKnown RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 A0A0B4J2E0 115 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 A0A1B0GX12 115 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 URADA6NGE7 173 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 SPARCP09486 303 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 GPX4P36969 197 aaPredicted RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 CASRP41180 1078 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 SMAD4Q13485 552 aaKnown RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 SLC9A3R2Q15599 337 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 ELAVL1Q15717 326 aaKnown RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 MEP1BQ16820 701 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 PRAMEF8Q5VWM4 474 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 PRAMEF7Q5VXH5 474 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 NUDCD2Q8WVJ2 157 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 CCDC74AQ96AQ1 378 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 VWCEQ96DN2 955 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 SMIM3Q9BZL3 60 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 SRMSQ9H3Y6 488 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 RPS10P5Q9NQ39 176 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 CSAG2Q9Y5P2 127 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 FRMPD3Q5JV73 1810 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 PMS2P1A4D2B8 440 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 BCL2L11O43521 198 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 OR6A2O95222 327 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 HPGDP15428 266 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 GRK6P43250 576 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 S100A10P60903 97 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 RAB5BP61020 215 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 ELAVL3Q14576 367 aaKnown RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 ZIC1Q15915 447 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 ADAM5Q6NVV9 412 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 ZNF585AQ6P3V2 769 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 MOB3CQ70IA8 216 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 OR10H5Q8NGA6 315 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 OR51A2Q8NGJ7 313 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 STOML3Q8TAV4 291 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 MOGAT1Q96PD6 335 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 CST11Q9H112 138 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 UFSP2Q9NUQ7 469 aa11.93□□□□□ -0.5
MSH6-214ENST00000616033 MRPS23Q9Y3D9 190 aaKnown RBP11.93□□□□□ -0.5
MSH6-214ENST00000616033 CTSVO60911 334 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 LYPD3O95274 346 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 SNRNP70P08621 437 aaKnown RBP11.92□□□□□ -0.5
MSH6-214ENST00000616033 CALCBP10092 127 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 EDN3P14138 238 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 MYOGP15173 224 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 RFC3P40938 356 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 EIF1AXP47813 144 aaKnown RBP11.92□□□□□ -0.5
MSH6-214ENST00000616033 MRPS10P82664 201 aaKnown RBP11.92□□□□□ -0.5
MSH6-214ENST00000616033 SGCGQ13326 291 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 PEA15Q15121 130 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 IRF4Q15306 451 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 HNRNPA1L2Q32P51 320 aaKnown RBP11.92□□□□□ -0.5
MSH6-214ENST00000616033 ZNF528Q3MIS6 628 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 USP53Q70EK8 1073 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 CRIPAKQ8N1N5 446 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 ZNF615Q8N8J6 731 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 BHLHE23Q8NDY6 225 aa11.92□□□□□ -0.5
MSH6-214ENST00000616033 SEMA6DQ8NFY4 1073 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms