RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PIGFQ07326 219 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 CARD17Q5XLA6 110 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 OR2A2Q6IF42 318 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 FOXL2NBQ6ZUU3 175 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 SLC16A9Q7RTY1 509 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 CD163Q86VB7 1156 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 TUSC5Q8IXB3 177 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 TIGD4Q8IY51 512 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 OR4F15Q8NGB8 312 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 OR51L1Q8NGJ5 315 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 OR5M9Q8NGP3 310 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 OR6N1Q8NGY5 312 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 MBD3L2Q8NHZ7 208 aaPredicted RBP10.09□□□□□ -0.79
SLIRP-212ENST00000613856 FCGR1BQ92637 280 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 MCHR2Q969V1 340 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 TRIB1Q96RU8 372 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 MNTQ99583 582 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 TM9SF2Q99805 663 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 SLCO5A1Q9H2Y9 848 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 VCX3AQ9NNX9 186 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 B3GAT2Q9NPZ5 323 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 TINAGQ9UJW2 476 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF835Q9Y2P0 537 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 COMMD3-BMI1R4GMX3 469 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 SPG11Q96JI7 2443 aa10.09□□□□□ -0.79
SLIRP-212ENST00000613856 NIPBLQ6KC79 2804 aaeCLIP10.09□□□□□ -0.79
SLIRP-212ENST00000613856 PRRC2AP48634 2157 aaKnown RBP10.08□□□□□ -0.8
SLIRP-212ENST00000613856 INTS1Q8N201 2190 aaKnown RBP10.08□□□□□ -0.8
SLIRP-212ENST00000613856 TMEM129A0AVI4 362 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 MRPL33O75394 65 aaKnown RBP10.08□□□□□ -0.8
SLIRP-212ENST00000613856 APOL3O95236 402 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 TFP02787 698 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 TFAP2AP05549 437 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 CRHP06850 196 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 TPOP07202 933 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 QDPRP09417 244 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 OR2T7P0C7T2 308 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ABOP16442 354 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 JUNBP17275 347 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-212ENST00000613856 MYL12AP19105 171 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ATP6V1E1P36543 226 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 NR1H2P55055 460 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 HSF2Q03933 536 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 DBPQ10586 325 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ETFDHQ16134 617 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 C1orf185Q5T7R7 199 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 XAF1Q6GPH4 301 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF585AQ6P3V2 769 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 LRFN4Q6PJG9 635 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 PLXDC2Q6UX71 529 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 B3GLCTQ6Y288 498 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 KCTD8Q6ZWB6 473 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 SHFQ7M4L6 423 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 GLB1L2Q8IW92 636 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 SLC35F2Q8IXU6 374 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ACBD7Q8N6N7 88 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 C9orf106Q8NAJ2 232 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 SLC26A10Q8NG04 563 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 OR2T27Q8NH04 317 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 NRGNQ92686 78 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ZFP3Q96NJ6 502 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 INTS14Q96SY0 518 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF649Q9BS31 505 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ULBP2Q9BZM5 246 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 YIPF3Q9GZM5 350 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 CCDC90BQ9GZT6 254 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 TP63Q9H3D4 680 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-212ENST00000613856 ACOT13Q9NPJ3 140 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 KCNG2Q9UJ96 466 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 COA3Q9Y2R0 106 aaPredicted RBP10.08□□□□□ -0.8
SLIRP-212ENST00000613856 UGT2A1Q9Y4X1 527 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 FAM215AQ9Y5M1 114 aa10.08□□□□□ -0.8
SLIRP-212ENST00000613856 C12orf71A8MTZ7 269 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 FAM171A2A8MVW0 826 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 RPL36A-HNRNPH2H7BZ11 118 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 PRRG2O14669 202 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 DHHO43323 396 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 SELENOFO60613 162 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 UPK3AO75631 287 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 MRPL3P09001 348 aaKnown RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 LIMS3P0CW19 117 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 LIMS4P0CW20 117 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 LAP3P28838 519 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 TIMP3P35625 211 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 NAA10P41227 235 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 RPL5P46777 297 aaKnown RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ALDH3B2P48448 385 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF84P51523 738 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 TLE4Q04727 773 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 EMX1Q04741 257 aaPredicted RBP10.07□□□□□ -0.8
SLIRP-212ENST00000613856 RBPJQ06330 500 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 PCK2Q16822 640 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 TEX30Q5JUR7 227 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 PHYHD1Q5SRE7 291 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 UBE2UQ5VVX9 321 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 RTL6Q6ICC9 239 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 RPTNQ6XPR3 784 aa10.07□□□□□ -0.8
SLIRP-212ENST00000613856 ZNF367Q7RTV3 350 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms