RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NKX2-6A6NCS4 301 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 CCDC182A6NF36 153 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 WIPF3A6NGB9 483 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 TMCC2O75069 709 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 SEC14L2O76054 403 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 MPZL1O95297 269 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 GPANK1O95872 356 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 TFP02787 698 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 GAAP10253 952 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 UGT2B10P36537 528 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 MTNR1AP48039 350 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 POU4F2Q12837 409 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 C1QTNF12Q5T7M4 302 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 KLHL24Q6TFL4 600 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 P2RY8Q86VZ1 359 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 ZNF511Q8NB15 262 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 C11orf40Q8WZ69 217 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 NABP1Q96AH0 204 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 WACQ9BTA9 647 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 MARCH7Q9H992 704 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 KCNG2Q9UJ96 466 aa12.89□□□□□ -0.35
CD48-203ENST00000613788 NCOA6Q14686 2063 aaPredicted RBP12.89□□□□□ -0.35
CD48-203ENST00000613788 FREM1Q5H8C1 2179 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 A0A096LPE4 126 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 A0A1W2PPZ6 126 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 TVP23AA6NH52 213 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 CST2P09228 141 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 ATP6V1E1P36543 226 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 CXCR4P61073 352 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 UBE2NP61088 152 aaKnown RBP12.88□□□□□ -0.35
CD48-203ENST00000613788 ADAM8P78325 824 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 GGTLC2Q14390 218 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 CDSNQ15517 529 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 TSC22D1Q15714 1073 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 TBRG1Q3YBR2 411 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 C6orf141Q5SZD1 244 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SLC16A14Q7RTX9 510 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 DPPA2Q7Z7J5 298 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 ERI1Q8IV48 349 aaKnown RBP12.88□□□□□ -0.35
CD48-203ENST00000613788 LRRC18Q8N456 261 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
CD48-203ENST00000613788 INTS14Q96SY0 518 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SH3GL3Q99963 347 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 OBP2BQ9NPH6 170 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 MRPL22Q9NWU5 206 aaKnown RBP12.88□□□□□ -0.35
CD48-203ENST00000613788 POLR1DQ9Y2S0 133 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 OR5H1A6NKK0 313 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 ZNF593O00488 134 aaPredicted RBP12.88□□□□□ -0.35
CD48-203ENST00000613788 SCG5P05408 212 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 PPP3CBP16298 524 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 PAX7P23759 505 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 CAPZA2P47755 286 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 ENTPD1P49961 510 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 NUDT6P53370 316 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 PCBD1P61457 104 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SMN1Q16637 294 aaKnown RBP12.88□□□□□ -0.35
CD48-203ENST00000613788 SLC36A2Q495M3 483 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 HIKESHIQ53FT3 197 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 KLHL22Q53GT1 634 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 TEX30Q5JUR7 227 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 TIMM23BQ5SRD1 257 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SSX8Q7RTT4 187 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.88□□□□□ -0.35
CD48-203ENST00000613788 SYT9Q86SS6 491 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SKA3Q8IX90 412 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 TIGD4Q8IY51 512 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SSC4DQ8WTU2 575 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 RNFT2Q96EX2 444 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 ZNF416Q9BWM5 594 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 ACTR6Q9GZN1 396 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 AMBNQ9NP70 447 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 EMC7Q9NPA0 242 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 SLC17A5Q9NRA2 495 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 PLCXD1Q9NUJ7 323 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 AMDHD2Q9Y303 409 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 COMMD3-BMI1R4GMX3 469 aa12.88□□□□□ -0.35
CD48-203ENST00000613788 IRGMA1A4Y4 181 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 WNT11O96014 354 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 DBTP11182 482 aaKnown RBP12.87□□□□□ -0.35
CD48-203ENST00000613788 SORDQ00796 357 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 ZNF91Q05481 1191 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 AQP6Q13520 282 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 ENDOGQ14249 297 aaKnown RBP12.87□□□□□ -0.35
CD48-203ENST00000613788 MEP1BQ16820 701 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 UGT2A3Q6UWM9 527 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 LYPD4Q6UWN0 246 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 SLC16A9Q7RTY1 509 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 BPIFB6Q8NFQ5 453 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 OR6N2Q8NGY6 317 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 OR2AJ1Q8NGZ0 328 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 HSD17B8Q92506 261 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 HTRA1Q92743 480 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 S100PBPQ96BU1 408 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 MUCL1Q96DR8 90 aa12.87□□□□□ -0.35
CD48-203ENST00000613788 CNN2Q99439 309 aaKnown RBP12.87□□□□□ -0.35
CD48-203ENST00000613788 RNF121Q9H920 327 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms