RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 ADAM19Q9H013 955 aa13.25□□□□□ -0.29
CTCFL-219ENST00000608720 SYT4Q9H2B2 425 aa13.25□□□□□ -0.29
CTCFL-219ENST00000608720 PLCL2Q9UPR0 1127 aa13.25□□□□□ -0.29
CTCFL-219ENST00000608720 LOC100289279A0A1B0GTE1 492 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 TTLL8A6PVC2 850 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 POM121CA8CG34 1229 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 C17orf105B2RV13 164 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 DRD1P21728 446 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 SLC6A8P48029 635 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 POU3F4P49335 361 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 H2BFSP57053 126 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 ODF4Q2M2E3 257 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 WDR38Q5JTN6 314 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 NKAIN2Q5VXU1 208 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 ZNF600Q6ZNG1 722 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 PARGQ86W56 976 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 FAM3DQ96BQ1 224 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 LAT2Q9GZY6 243 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 ALX4Q9H161 411 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-219ENST00000608720 ELOVL3Q9HB03 270 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 MRTO4Q9UKD2 239 aaKnown RBP13.24□□□□□ -0.29
CTCFL-219ENST00000608720 DOCK8Q8NF50 2099 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 SPTY2D1-AS1A0A0U1RR47 76 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 SLC17A2O00624 439 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 GOSR2O14653 212 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 PRKNO60260 465 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-219ENST00000608720 SIX6O95475 246 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 ZNF35P13682 527 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 C1orf61Q13536 156 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 SLC17A1Q14916 467 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 PGAP1Q75T13 922 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 MUC20Q8N307 709 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-219ENST00000608720 OR8B4Q96RC9 309 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 DMRTA2Q96SC8 542 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 ARL6Q9H0F7 186 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 APMAPQ9HDC9 416 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 GPN3Q9UHW5 284 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-219ENST00000608720 MUC3AQ02505 3323 aa13.24□□□□□ -0.29
CTCFL-219ENST00000608720 FXYD6-FXYD2A0A087WZ82 144 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 TCRBV21S2A2A0A5A6 115 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 XKRYO14609 159 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 CCKBRP32239 447 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 RPS27P42677 84 aaKnown RBP13.23□□□□□ -0.29
CTCFL-219ENST00000608720 MC2RQ01718 297 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 GUCA2AQ02747 115 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 C2orf68Q2NKX9 166 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 TSSK4Q6SA08 328 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 OR51S1Q8NGJ8 323 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 TNFAIP8L1Q8WVP5 186 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 SLC46A1Q96NT5 459 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 GAS2L1Q99501 681 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-219ENST00000608720 FXYD6Q9H0Q3 95 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 UPB1Q9UBR1 384 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 KCNG2Q9UJ96 466 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 H3BSH0 61 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 SULT1C2O00338 296 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 KDM4BO94953 1096 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 MELTFP08582 738 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 ITGA5P08648 1049 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 RPA2P15927 270 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 CXCR1P25024 350 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 SLC37A1P57057 533 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 ACTBP60709 375 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 ACTG1P63261 375 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 DEFA5Q01523 94 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 FZD2Q14332 565 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 SHHQ15465 462 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 MEP1BQ16820 701 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 ZNF528Q3MIS6 628 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 YOD1Q5VVQ6 348 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-219ENST00000608720 STEAP1BQ6NZ63 245 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 LRRC69Q6ZNQ3 347 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 CLEC1AQ8NC01 280 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 ZNF524Q96C55 264 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 ZNF285Q96NJ3 590 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 AMELYQ99218 206 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 MAP3K3Q99759 626 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 NXF5Q9H1B4 397 aaKnown RBP13.23□□□□□ -0.29
CTCFL-219ENST00000608720 EXO5Q9H790 373 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 TMEM138Q9NPI0 162 aa13.23□□□□□ -0.29
CTCFL-219ENST00000608720 ARHGEF17Q96PE2 2063 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-219ENST00000608720 C10orf142B7Z368 130 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 GPANK1O95872 356 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 WNT11O96014 354 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 BGLAPP02818 100 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 IGHV4-34P06331 123 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 RFC3P40938 356 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 CENPAP49450 140 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 C4orf46Q504U0 113 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 FAM209BQ5JX69 171 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 OR7E24Q6IFN5 339 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 FAM166AQ6J272 317 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 SLC18B1Q6NT16 456 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 ZNF704Q6ZNC4 412 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-219ENST00000608720 CCDC36Q8IYA8 594 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 ZNF679Q8IYX0 411 aa13.22□□□□□ -0.29
CTCFL-219ENST00000608720 FRMD1Q8N878 549 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms