RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 USP43Q70EL4 1123 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 CALHM3Q86XJ0 350 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 SLC25A40Q8TBP6 338 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 FAM216AQ8WUB2 273 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 CCL17Q92583 94 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 GCDHQ92947 438 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 ELMOD3Q96FG2 381 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 MARS2Q96GW9 593 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 TIMD4Q96H15 378 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 SH3GL1Q99961 368 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 OR2J1Q9GZK6 312 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 POLR2J2Q9GZM3 115 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 POLR2J3Q9H1A7 115 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 TXNIPQ9H3M7 391 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 SMURF2Q9HAU4 748 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 MED31Q9Y3C7 131 aa11.37□□□□□ -0.59
POLR2J3-219ENST00000608621 A0A0G2JMP0 313 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 A0A0X1KG70 313 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 TMEM89A2RUT3 159 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 EDF1O60869 148 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 ADRA2CP18825 462 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 LAP3P28838 519 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 COMPP49747 757 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 ALG10Q5BKT4 473 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 DCAF12L2Q5VW00 463 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 METTL21CQ5VZV1 264 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 C1QL2Q7Z5L3 287 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 OR4M2Q8NGB6 313 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 KLF14Q8TD94 323 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 IPCEF1Q8WWN9 437 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 LRRC58Q96CX6 371 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 ZNF583Q96ND8 569 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 RBP7Q96R05 134 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 WNT5BQ9H1J7 359 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 KLHL21Q9UJP4 597 aa11.36□□□□□ -0.59
POLR2J3-219ENST00000608621 PLSCR5A0PG75 271 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 ZSCAN5BA6NJL1 495 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 NPIPB13A6NJU9 1138 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 NPIPB4C9JG80 1138 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 J3QLI3 93 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 PIP5K1CO60331 668 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 UBOX5O94941 541 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 NGFP01138 241 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 CST2P09228 141 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 THRBP10828 461 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 ARFIP2P53365 341 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 CTXN1P60606 82 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 PPP1CBP62140 327 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 TOP3AQ13472 1001 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 TAF11Q15544 211 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 SPRNQ5BIV9 151 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 MBNL2Q5VZF2 373 aaKnown RBP11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 UNQ6126/PRO20091Q6UXV3 157 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 ZNF771Q7L3S4 317 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 ALDH16A1Q8IZ83 802 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 CLDN22Q8N7P3 220 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 C3orf56Q8N813 242 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 OR8J3Q8NGG0 315 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 ABHD4Q8TB40 342 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 NANPQ8TBE9 248 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 C10orf82Q8WW14 230 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 JMJD8Q96S16 334 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 GAL3ST1Q99999 423 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 ALG12Q9BV10 488 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 OR2H1Q9GZK4 316 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 EGLN1Q9GZT9 426 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 C7orf69Q9H7B7 122 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 HIF3AQ9Y2N7 669 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 TIMM10BQ9Y5J6 103 aa11.35□□□□□ -0.59
POLR2J3-219ENST00000608621 ISPDA4D126 451 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 HMGB1P1B2RPK0 211 aaPredicted RBP11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 FXYD1O00168 92 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 NPPAP01160 153 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 IFNA14P01570 189 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 NR2C1P13056 603 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 IFI30P13284 250 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 KDELR2P33947 212 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 LIPAP38571 399 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 GUCA1AP43080 201 aaPredicted RBP11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 RPL27P61353 136 aaKnown RBP11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 LCN2P80188 198 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 SLC3A1Q07837 685 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 ST3GAL3Q11203 375 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 CYBRD1Q53TN4 286 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 ZNF774Q6NX45 483 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 ERICH5Q6P6B1 374 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 IGFN1Q86VF2 1251 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 C1orf174Q8IYL3 243 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 BPIFA2Q96DR5 249 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 TPD52L3Q96J77 140 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 C4orf45Q96LM5 186 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 SLC6A7Q99884 636 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 SIKE1Q9BRV8 207 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 RBM4Q9BWF3 364 aaKnown RBP11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 TMEM120AQ9BXJ8 343 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 ELOVL3Q9HB03 270 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 MSL2Q9HCI7 577 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 CYSLTR2Q9NS75 346 aa11.34□□□□□ -0.59
POLR2J3-219ENST00000608621 UBAP1Q9NZ09 502 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms