RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 NR2C1P13056 603 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 ATP6V1B2P21281 511 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 APEX1P27695 318 aaKnown RBP16.55■□□□□ 0.24
SGMS1-208ENST00000608287 FMODQ06828 376 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 SEC23BQ15437 767 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 FAM205BPQ63HN1 556 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 FGFBP3Q8TAT2 258 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 NSMAFQ92636 917 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF75AQ96N20 296 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 VRK1Q99986 396 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-208ENST00000608287 ALG12Q9BV10 488 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 NDEL1Q9GZM8 345 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 DENND2DQ9H6A0 471 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-208ENST00000608287 RNF121Q9H920 327 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 AURKCQ9UQB9 309 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 TGP01266 2768 aa16.55■□□□□ 0.24
SGMS1-208ENST00000608287 A6NIZ1 184 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 PDE5AO76074 875 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF14P17017 642 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-208ENST00000608287 SERPINF1P36955 418 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 OMPP47874 163 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF133P52736 654 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-208ENST00000608287 RAP1BP61224 184 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 RAP1AP62834 184 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 ERVK-25P63136 954 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 HGFACQ04756 655 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 RAB39AQ14964 217 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 SWI5Q1ZZU3 235 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 C10orf128Q5T292 105 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 SHQ1Q6PI26 577 aaKnown RBP16.54■□□□□ 0.24
SGMS1-208ENST00000608287 USP43Q70EL4 1123 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 SLC16A14Q7RTX9 510 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 ZDHHC21Q8IVQ6 265 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 NUP37Q8NFH4 326 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF519Q8TB69 540 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 RBP7Q96R05 134 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 RAB1BQ9H0U4 201 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 METTL17Q9H7H0 456 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-208ENST00000608287 SMURF2Q9HAU4 748 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 IL1RAPQ9NPH3 570 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 GRHPRQ9UBQ7 328 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 FBXL3Q9UKT7 428 aa16.54■□□□□ 0.24
SGMS1-208ENST00000608287 PRPF19Q9UMS4 504 aaKnown RBP16.54■□□□□ 0.24
SGMS1-208ENST00000608287 SH3PXD2BA1X283 911 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 CD14P08571 375 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 TACSTD2P09758 323 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 OR4A8P0C604 315 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF26P17031 533 aaPredicted RBP16.53■□□□□ 0.24
SGMS1-208ENST00000608287 GIFP27352 417 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 RRM2P31350 389 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 CDAP32320 146 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 CDH15P55291 814 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 DAG1Q14118 895 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 SLC36A2Q495M3 483 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 NRN1LQ496H8 165 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 MTX3Q5HYI7 312 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 THEM4Q5T1C6 240 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 KRT80Q6KB66 452 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 TMEM53Q6P2H8 277 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 GLCCI1Q86VQ1 547 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 DHFR2Q86XF0 187 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 LRRC18Q8N456 261 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 CLDN22Q8N7P3 220 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 FNDC8Q8TC99 324 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 NMD3Q96D46 503 aaKnown RBP16.53■□□□□ 0.24
SGMS1-208ENST00000608287 RSRC1Q96IZ7 334 aaKnown RBP16.53■□□□□ 0.24
SGMS1-208ENST00000608287 FUZQ9BT04 418 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 MUC13Q9H3R2 512 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 SIGLEC7Q9Y286 467 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 ADAM18Q9Y3Q7 739 aa16.53■□□□□ 0.24
SGMS1-208ENST00000608287 IGKV1D-43A0A0B4J1Z2 117 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 UNC119BA6NIH7 251 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 VSTM5A8MXK1 200 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 B9A039 149 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 NDUFB2O95178 105 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 THBS4P35443 961 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 SNTB2Q13425 540 aaKnown RBP16.52■□□□□ 0.24
SGMS1-208ENST00000608287 TRIM25Q14258 630 aaKnown RBP16.52■□□□□ 0.24
SGMS1-208ENST00000608287 ADIPOQQ15848 244 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 SGCAQ16586 387 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 MST1LQ2TV78 715 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 SLC25A47Q6Q0C1 308 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 DPPA2Q7Z7J5 298 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 Q96M85 177 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 ZNF570Q96NI8 536 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 C1orf21Q9H246 121 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 KCNN2Q9H2S1 579 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 SIAEQ9HAT2 523 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 TAS2R1Q9NYW7 299 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 TMCC3Q9ULS5 477 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 PCDHB10Q9UN67 800 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 UGT2A1Q9Y4X1 527 aa16.52■□□□□ 0.24
SGMS1-208ENST00000608287 LRP5LA4QPB2 252 aa16.51■□□□□ 0.23
SGMS1-208ENST00000608287 B4DSR2 109 aa16.51■□□□□ 0.23
SGMS1-208ENST00000608287 H7C1C5 153 aa16.51■□□□□ 0.23
SGMS1-208ENST00000608287 XKRYO14609 159 aa16.51■□□□□ 0.23
SGMS1-208ENST00000608287 OR10H3O60404 316 aa16.51■□□□□ 0.23
SGMS1-208ENST00000608287 PTP4A3O75365 173 aa16.51■□□□□ 0.23
SGMS1-208ENST00000608287 SERPINA5P05154 406 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms