RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 STARP49675 285 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 GDI2P50395 445 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ZNF84P51523 738 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 MRPS34P82930 218 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 FABP5Q01469 135 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 FMODQ06828 376 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CAMK2DQ13557 499 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ETFDHQ16134 617 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 MOGQ16653 247 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ZNF404Q494X3 552 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 LIPNQ5VXI9 398 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 LYPD4Q6UWN0 246 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 TPRA1Q86W33 373 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CROCCP3Q8IVE0 287 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 SPACA3Q8IXA5 215 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 RFLNBQ8N5W9 214 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 OR6N1Q8NGY5 312 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ST7LQ8TDW4 575 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 SNRNP27Q8WVK2 155 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 RNF133Q8WVZ7 376 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 S100ZQ8WXG8 99 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ZNF385AQ96PM9 386 aaKnown RBP10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 PRDM14Q9GZV8 571 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 NELFAQ9H3P2 528 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 RERGLQ9H628 205 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 GLRX2Q9NS18 164 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 ACOXLQ9NUZ1 547 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CYB5R1Q9UHQ9 305 aa10.9□□□□□ -0.66
NEDD8-MDP1-203ENST00000604306 CACNA1CQ13936 2221 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 IGKV1D-43A0A0B4J1Z2 117 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TRBV2A0A0J9YWF9 115 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 IQCMA0A1B0GVH7 501 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OR14I1A6ND48 311 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 E9PI62 339 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 K7ENP7 123 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DHHO43323 396 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ARL6IP5O75915 188 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SPARCP09486 303 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MSR1P21757 451 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 EDNRAP25101 427 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MAPK3P27361 379 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RIDAP52758 137 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 HCCSP53701 268 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LSM3P62310 102 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 DYNC1I2Q13409 638 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ALKBH1Q13686 389 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 EIF2B1Q14232 305 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 INO80CQ6PI98 192 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LRFN4Q6PJG9 635 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CHMP1BQ7LBR1 199 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MED12LQ86YW9 2145 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 WDFY1Q8IWB7 410 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 UBQLNLQ8IYU4 475 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 YIPF7Q8N8F6 280 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TBC1D15Q8TC07 691 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CPT1CQ8TCG5 803 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 THEM6Q8WUY1 208 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 C11orf40Q8WZ69 217 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GHSRQ92847 366 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SLC25A46Q96AG3 418 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 WDYHV1Q96HA8 205 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ABHD6Q9BV23 337 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 C1orf198Q9H425 327 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 CCDC86Q9H6F5 360 aaKnown RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 LDAHQ9H6V9 325 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 MOB1AQ9H8S9 216 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 POLE4Q9NR33 117 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 KLHDC2Q9Y2U9 406 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF281Q9Y2X9 895 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 UGT2A1Q9Y4X1 527 aa10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SIRT4Q9Y6E7 314 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 IGHV3-15A0A0B4J1V0 119 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TRAV1-2A0A0B4J238 106 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 PRR32B1ATL7 298 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 H0YC42 278 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RPL36A-HNRNPH2H7BZ11 118 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 OR8G3PP0DMU2 310 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 KLK2P20151 261 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RFC3P40938 356 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RORCP51449 518 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ROR2Q01974 943 aaKnown RBP10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SF3B4Q15427 424 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■■■□ 23
NEDD8-MDP1-203ENST00000604306 MEP1BQ16820 701 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZNF829Q3KNS6 432 aaPredicted RBP10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 RNFT1Q5M7Z0 435 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 C22orf42Q6IC83 251 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ARL9Q6T311 187 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 UNQ9370/PRO34162Q6UXP9 181 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 TMEM91Q6ZNR0 172 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 AAED1Q7RTV5 226 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 KRT77Q7Z794 578 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ADGRE4PQ86SQ3 457 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SYT9Q86SS6 491 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 SIAH3Q8IW03 269 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 GPR137CQ8N3F9 429 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ZFP41Q8N8Y5 198 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 ABHD4Q8TB40 342 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 AP3S1Q92572 193 aa10.88□□□□□ -0.67
NEDD8-MDP1-203ENST00000604306 NSMAFQ92636 917 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms