RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	CDH20	Q9HBT6	801 aa		11.32	□□□□□ -0.6
SRRM1-223	ENST00000600523	SRA1	Q9HD15	236 aa	Known RBP	11.32	□□□□□ -0.6
SRRM1-223	ENST00000600523	RPRD1B	Q9NQG5	326 aa	Known RBP	11.32	□□□□□ -0.6
SRRM1-223	ENST00000600523	POLE4	Q9NR33	117 aa		11.32	□□□□□ -0.6
SRRM1-223	ENST00000600523	PLEKHA6	Q9Y2H5	1048 aa		11.32	□□□□□ -0.6
SRRM1-223	ENST00000600523	UGT2A1	Q9Y4X1	527 aa		11.32	□□□□□ -0.6
SRRM1-223	ENST00000600523	CRYBG3	Q68DQ2	2970 aa		11.32	□□□□□ -0.6
SRRM1-223	ENST00000600523	CELSR2	Q9HCU4	2923 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	SHISA9	B4DS77	424 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	ATP6V1G2-DDX39B	F2Z307	99 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	ZNF823	P16415	610 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	GRK5	P34947	590 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	FABP6	P51161	128 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	RPS23	P62266	143 aa	Known RBP	11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	LSM6	P62312	80 aa	Known RBP	11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	ESRRG	P62508	458 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	AQP6	Q13520	282 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	GINS1	Q14691	196 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	RAB39A	Q14964	217 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	PGGHG	Q32M88	737 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	ARL9	Q6T311	187 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	FOXL2NB	Q6ZUU3	175 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	HS3ST5	Q8IZT8	346 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	ICA1L	Q8NDH6	482 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	SLC30A7	Q8NEW0	376 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	NRGN	Q92686	78 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	OTULIN	Q96BN8	352 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	RBM4B	Q9BQ04	359 aa	Known RBP	11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	RBM4	Q9BWF3	364 aa	Known RBP	11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	RACGAP1	Q9H0H5	632 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	SEMA6A	Q9H2E6	1030 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	BEX4	Q9NWD9	120 aa	Predicted RBP	11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	FBXO9	Q9UK97	447 aa	Predicted RBP	11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	B9D1	Q9UPM9	204 aa		11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	COA3	Q9Y2R0	106 aa	Predicted RBP	11.31	□□□□□ -0.6
SRRM1-223	ENST00000600523	IGKV1D-43	A0A0B4J1Z2	117 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	OR6C68	A6NDL8	312 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	SMPD2	O60906	423 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	PATE4	P0C8F1	98 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	ZNF14	P17017	642 aa	Predicted RBP	11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	ZNF32	P17041	273 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	IGFBP5	P24593	272 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	APOBEC3A	P31941	199 aa	Predicted RBP	11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	GDI2	P50395	445 aa	Known RBP	11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	SPOCK1	Q08629	439 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	DAG1	Q14118	895 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	PABPC1L2A	Q5JQF8	200 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	FAHD1	Q6P587	224 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	PARP8	Q8N3A8	854 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	OR8D4	Q8NGM9	314 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	OR2AJ1	Q8NGZ0	328 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	HTRA1	Q92743	480 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	NABP1	Q96AH0	204 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	MBD6	Q96DN6	1003 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	ZNF416	Q9BWM5	594 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	CMC2	Q9NRP2	79 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	EIF3K	Q9UBQ5	218 aa	Known RBP	11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	ITGB1BP2	Q9UKP3	347 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	NDRG4	Q9ULP0	352 aa	Known RBP	11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	OAZ3	Q9UMX2	235 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	LAMP3	Q9UQV4	416 aa		11.3	□□□□□ -0.6
SRRM1-223	ENST00000600523	NOTCH2	Q04721	2471 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	ALPK2	Q86TB3	2170 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523		A0A1W2PPR1	153 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	ZNF503-AS2	A6NEH8	195 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	SAC3D1	A6NKF1	404 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	ATE1	O95260	518 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	BAG2	O95816	211 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	IGFBP1	P08833	259 aa	Predicted RBP	11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	CELA3B	P08861	270 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	CCNO	P22674	350 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	STOM	P27105	288 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	FMO3	P31513	532 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	RAD52	P43351	418 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	SLC25A1	P53007	311 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	CRISP1	P54107	249 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	SELENOV	P59797	346 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	CRMP1	Q14194	572 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	ETFDH	Q16134	617 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	DEFB113	Q30KQ7	82 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	VHLL	Q6RSH7	139 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	ZBTB46	Q86UZ6	589 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	OR6V1	Q8N148	313 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	MUC15	Q8N387	334 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	CYB561A3	Q8NBI2	242 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	SLC37A3	Q8NCC5	494 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	NPEPL1	Q8NDH3	523 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	NUP37	Q8NFH4	326 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	GJC3	Q8NFK1	279 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	OR4Q3	Q8NH05	313 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	FBXO17	Q96EF6	278 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	TRMT61A	Q96FX7	289 aa	Known RBP	11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	MS4A3	Q96HJ5	214 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	TSSK2	Q96PF2	358 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	OR2H1	Q9GZK4	316 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	GABARAPL1	Q9H0R8	117 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	LIME1	Q9H400	295 aa		11.29	□□□□□ -0.6
SRRM1-223	ENST00000600523	S100A14	Q9HCY8	104 aa		11.29	□□□□□ -0.6

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