RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 NANOS1Q8WY41 292 aaKnown RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 DDOQ99489 341 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 NIPSNAP1Q9BPW8 284 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 IFT27Q9BW83 186 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 ZNF416Q9BWM5 594 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 CACNG6Q9BXT2 260 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 DGCR6LQ9BY27 220 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 NUAK2Q9H093 628 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 WNT5BQ9H1J7 359 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 CXorf56Q9H5V9 222 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 DENND2DQ9H6A0 471 aaPredicted RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 KRCC1Q9NPI7 259 aaPredicted RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 POLE4Q9NR33 117 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 COA3Q9Y2R0 106 aaPredicted RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 CDH10Q9Y6N8 788 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 LOC100509620A0A075B734 347 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 IGLV1-36A0A0B4J1U3 117 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 OR6C68A6NDL8 312 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 TRIM64A6NGJ6 449 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 TRIM64BA6NI03 449 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 XKRYO14609 159 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 AHCYL1O43865 530 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 SLC16A7O60669 478 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 TMCC2O75069 709 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 STAMBPO95630 424 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 CST2P09228 141 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 NPR2P20594 1047 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 PRKACGP22612 351 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 APEX1P27695 318 aaKnown RBP9.62□□□□□ -0.87
VRK3-210ENST00000596121 SLC6A6P31641 620 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 SERPINF1P36955 418 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 RPS6KA3P51812 740 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 ATP5J2P56134 94 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 CBX1P83916 185 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 SLC36A2Q495M3 483 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 PABPC1L2AQ5JQF8 200 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 SLC35F1Q5T1Q4 408 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 SHEQ5VZ18 495 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 KRT80Q6KB66 452 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 TMEM53Q6P2H8 277 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 PRSS57Q6UWY2 283 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 OR6V1Q8N148 313 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 LINC00471Q8N535 108 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 SLC30A7Q8NEW0 376 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 OR4F15Q8NGB8 312 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 OR4Q3Q8NH05 313 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 FNDC8Q8TC99 324 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 ZNRF4Q8WWF5 429 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 POP5Q969H6 163 aaKnown RBP9.62□□□□□ -0.87
VRK3-210ENST00000596121 Q96MF0 132 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 NMNAT3Q96T66 252 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 FEVQ99581 238 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 KCNS3Q9BQ31 491 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 OR2H1Q9GZK4 316 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 FN3KQ9H479 309 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 RNF121Q9H920 327 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 MOV10Q9HCE1 1003 aaKnown RBP9.62□□□□□ -0.87
VRK3-210ENST00000596121 IL20Q9NYY1 176 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 REV1Q9UBZ9 1251 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 B9D1Q9UPM9 204 aa9.62□□□□□ -0.87
VRK3-210ENST00000596121 FAM171A2A8MVW0 826 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 KHDRBS3O75525 346 aaKnown RBP9.61□□□□□ -0.87
VRK3-210ENST00000596121 TIPRLO75663 272 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 SOX14O95416 240 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 NR2C1P13056 603 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 CD99P14209 185 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 MSR1P21757 451 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 SNTB2Q13425 540 aaKnown RBP9.61□□□□□ -0.87
VRK3-210ENST00000596121 DAG1Q14118 895 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 EFNB3Q15768 340 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 ZNF774Q6NX45 483 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 LEG1Q6P5S2 330 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 CD300LDQ6UXZ3 194 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 DNM1P46Q6ZS02 220 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 DPPA2Q7Z7J5 298 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 ADCK1Q86TW2 530 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 LRP11Q86VZ4 500 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 NPEPL1Q8NDH3 523 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 SDR9C7Q8NEX9 313 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 IL17RDQ8NFM7 739 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 GIPC3Q8TF64 312 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 C11orf40Q8WZ69 217 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 POM121L2Q96KW2 1035 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 DOK1Q99704 481 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 NDEL1Q9GZM8 345 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 PLK3Q9H4B4 646 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 RERGLQ9H628 205 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 ZNF442Q9H7R0 627 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 SRA1Q9HD15 236 aaKnown RBP9.61□□□□□ -0.87
VRK3-210ENST00000596121 FAIMQ9NVQ4 179 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 ARMC1Q9NVT9 282 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 DNAJB9Q9UBS3 223 aa9.61□□□□□ -0.87
VRK3-210ENST00000596121 ZANQ9Y493 2812 aa9.6□□□□□ -0.87
VRK3-210ENST00000596121 IDH3BO43837 385 aa9.6□□□□□ -0.87
VRK3-210ENST00000596121 LY6HO94772 140 aa9.6□□□□□ -0.87
VRK3-210ENST00000596121 TFP02787 698 aa9.6□□□□□ -0.87
VRK3-210ENST00000596121 FAM157BP0CG42 384 aa9.6□□□□□ -0.87
VRK3-210ENST00000596121 GAAP10253 952 aa9.6□□□□□ -0.87
VRK3-210ENST00000596121 WNT5AP41221 380 aa9.6□□□□□ -0.87
VRK3-210ENST00000596121 RASSF2P50749 326 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms