RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 TMEM171Q8WVE6 324 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
USE1-206ENST00000595101 TRAF4Q9BUZ4 470 aaPredicted RBP13.3□□□□□ -0.28
USE1-206ENST00000595101 ZNF416Q9BWM5 594 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 NDEL1Q9GZM8 345 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 SRA1Q9HD15 236 aaKnown RBP13.3□□□□□ -0.28
USE1-206ENST00000595101 CA10Q9NS85 328 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 BEX4Q9NWD9 120 aaPredicted RBP13.3□□□□□ -0.28
USE1-206ENST00000595101 DNAJB9Q9UBS3 223 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 REV1Q9UBZ9 1251 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 OVOL3O00110 214 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 SMPD2O60906 423 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 E2F6O75461 281 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 SERPINA5P05154 406 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 MEP1BQ16820 701 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 MST1LQ2TV78 715 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 SLC36A3Q495N2 470 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 DTX2Q86UW9 622 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 MUC15Q8N387 334 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 IQCF1Q8N6M8 205 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 NPEPL1Q8NDH3 523 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 OR52E2Q8NGJ4 325 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 ZNRF4Q8WWF5 429 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 KCNS3Q9BQ31 491 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 TSSK6Q9BXA6 273 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 RPRD1BQ9NQG5 326 aaKnown RBP13.3□□□□□ -0.28
USE1-206ENST00000595101 POLE4Q9NR33 117 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
USE1-206ENST00000595101 ARID1AO14497 2285 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 GPRIN2O60269 458 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 NR2C1P13056 603 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 NPR2P20594 1047 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 APEX1P27695 318 aaKnown RBP13.29□□□□□ -0.28
USE1-206ENST00000595101 ADAM8P78325 824 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 PSG4Q00888 419 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 SLC36A2Q495M3 483 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 PABPC1L2AQ5JQF8 200 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 C11orf71Q6IPW1 123 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.29□□□□□ -0.28
USE1-206ENST00000595101 AMIGO2Q86SJ2 522 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 ADCK1Q86TW2 530 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 LRTOMTQ8WZ04 291 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 DDOQ99489 341 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 WNT5BQ9H1J7 359 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 TBC1D23Q9NUY8 699 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 GDF2Q9UK05 429 aaPredicted RBP13.29□□□□□ -0.28
USE1-206ENST00000595101 AP4S1Q9Y587 144 aa13.29□□□□□ -0.28
USE1-206ENST00000595101 IGLV1-36A0A0B4J1U3 117 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 APOBEC3AP31941 199 aaPredicted RBP13.28□□□□□ -0.28
USE1-206ENST00000595101 THBS4P35443 961 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 PTH2RP49190 550 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 NKX6-1P78426 367 aaPredicted RBP13.28□□□□□ -0.28
USE1-206ENST00000595101 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
USE1-206ENST00000595101 KPNB1Q14974 876 aaKnown RBP13.28□□□□□ -0.28
USE1-206ENST00000595101 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 CD300LDQ6UXZ3 194 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 JAZF1Q86VZ6 243 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 OR52L1Q8NGH7 329 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 PYDC1Q8WXC3 89 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 OR51B6Q9H340 312 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 B9D1Q9UPM9 204 aa13.28□□□□□ -0.28
USE1-206ENST00000595101 AHCYL1O43865 530 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 KHDRBS3O75525 346 aaKnown RBP13.27□□□□□ -0.28
USE1-206ENST00000595101 OR4A8P0C604 315 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 MSR1P21757 451 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 PAX7P23759 505 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 CENPAP49450 140 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 C11orf91Q3C1V1 193 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 ZNF774Q6NX45 483 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 SPNS3Q6ZMD2 512 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 LURAP1LQ8IV03 231 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 FBXL14Q8N1E6 418 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 SLC30A7Q8NEW0 376 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 C11orf40Q8WZ69 217 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 DUS3LQ96G46 650 aaKnown RBP13.27□□□□□ -0.28
USE1-206ENST00000595101 OR2H1Q9GZK4 316 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 CXorf56Q9H5V9 222 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 MOV10Q9HCE1 1003 aaKnown RBP13.27□□□□□ -0.28
USE1-206ENST00000595101 CCNB1IP1Q9NPC3 277 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 CBLN4Q9NTU7 201 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 ZNF701Q9NV72 531 aaPredicted RBP13.27□□□□□ -0.28
USE1-206ENST00000595101 FZR1Q9UM11 496 aa13.27□□□□□ -0.28
USE1-206ENST00000595101 LOC100509620A0A075B734 347 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 ARRDC5A6NEK1 342 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 CIB2O75838 187 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 CST2P09228 141 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 FAM157BP0CG42 384 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 GSTM3P21266 225 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 NR4A1P22736 598 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 POU1F1P28069 291 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 ERVS71-1P61550 626 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 SNTB2Q13425 540 aaKnown RBP13.27□□□□□ -0.29
USE1-206ENST00000595101 DAG1Q14118 895 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 ATP6AP1Q15904 470 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 AGAP6Q5VW22 663 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 ZNF544Q6NX49 715 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 TMEM53Q6P2H8 277 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 LYPD4Q6UWN0 246 aa13.27□□□□□ -0.29
USE1-206ENST00000595101 GLB1L2Q8IW92 636 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms