RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CCL19Q99731 98 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 GRIP2Q9C0E4 1043 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 RACGAP1Q9H0H5 632 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 NOX3Q9HBY0 568 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 KIF17Q9P2E2 1029 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 FKBP7Q9Y680 259 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 ATP23Q9Y6H3 246 aa22.37■■□□□ 1.17
TRIM28-204ENST00000594806 C12orf71A8MTZ7 269 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 E7EQL1 145 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 ATP6V1G2-DDX39BF2Z307 99 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 H3BN98 237 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 CELA3BP08861 270 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 DANCRP0C864 163 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 LSM6P62312 80 aaKnown RBP22.36■■□□□ 1.17
TRIM28-204ENST00000594806 SLC35F1Q5T1Q4 408 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 FAHD1Q6P587 224 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 ZBTB46Q86UZ6 589 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 NPEPL1Q8NDH3 523 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 LRTOMTQ8WZ04 291 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 NEUROG1Q92886 237 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 B9D1Q9UPM9 204 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 COA3Q9Y2R0 106 aaPredicted RBP22.36■■□□□ 1.17
TRIM28-204ENST00000594806 SPEF1Q9Y4P9 236 aa22.36■■□□□ 1.17
TRIM28-204ENST00000594806 IGHV2OR16-5A0A0B4J2B6 119 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 IQCMA0A1B0GVH7 501 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 IFNGP01579 166 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 PATE4P0C8F1 98 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 RAB39AQ14964 217 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 KCNMB1Q16558 191 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 DEFB113Q30KQ7 82 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 SLC27A4Q6P1M0 643 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 PARP8Q8N3A8 854 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 NUP37Q8NFH4 326 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 OR1J2Q8NGS2 313 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 TMEM171Q8WVE6 324 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 IGFBPL1Q8WX77 278 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 PYDC1Q8WXC3 89 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 HTRA1Q92743 480 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 DDOQ99489 341 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 FOXC2Q99958 501 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 OSBPL10Q9BXB5 764 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 TIMM10BQ9Y5J6 103 aa22.35■■□□□ 1.17
TRIM28-204ENST00000594806 CCDC168Q8NDH2 2452 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 OR6C68A6NDL8 312 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 VSTM5A8MXK1 200 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 IGFBP1P08833 259 aaPredicted RBP22.34■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF23P17027 643 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF32P17041 273 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 GRK5P34947 590 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 HSF2Q03933 536 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 GLO1Q04760 184 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF362Q5T0B9 420 aaPredicted RBP22.34■■□□□ 1.17
TRIM28-204ENST00000594806 AGAP6Q5VW22 663 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 AMIGO2Q86SJ2 522 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 MYPOPQ86VE0 399 aaPredicted RBP22.34■■□□□ 1.17
TRIM28-204ENST00000594806 ALDH16A1Q8IZ83 802 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 OR6V1Q8N148 313 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 SDR9C7Q8NEX9 313 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 OR4Q3Q8NH05 313 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 FBXO17Q96EF6 278 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 TEX12Q9BXU0 123 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 GABARAPL1Q9H0R8 117 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 CXorf56Q9H5V9 222 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 RERGLQ9H628 205 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 SRA1Q9HD15 236 aaKnown RBP22.34■■□□□ 1.17
TRIM28-204ENST00000594806 RPRD1BQ9NQG5 326 aaKnown RBP22.34■■□□□ 1.17
TRIM28-204ENST00000594806 PAPOLBQ9NRJ5 636 aaKnown RBP22.34■■□□□ 1.17
TRIM28-204ENST00000594806 ENOPH1Q9UHY7 261 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 LRBAP50851 2863 aa22.34■■□□□ 1.17
TRIM28-204ENST00000594806 TEX15Q9BXT5 2789 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 IGLV1-36A0A0B4J1U3 117 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF35P13682 527 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 CALCRP30988 508 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 APOBEC3AP31941 199 aaPredicted RBP22.33■■□□□ 1.17
TRIM28-204ENST00000594806 TTKP33981 857 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 ENDOGQ14249 297 aaKnown RBP22.33■■□□□ 1.17
TRIM28-204ENST00000594806 PGGHGQ32M88 737 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 B3GLCTQ6Y288 498 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 DTX2Q86UW9 622 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF584Q8IVC4 421 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 FBXL14Q8N1E6 418 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 OR2T4Q8NH00 348 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 MS4A3Q96HJ5 214 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 ZNF416Q9BWM5 594 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 CMC2Q9NRP2 79 aa22.33■■□□□ 1.17
TRIM28-204ENST00000594806 RIIAD1A6NNX1 92 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 HMGN1P05114 100 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 ZNF3P17036 446 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 FABP6P51161 128 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 DAPP51397 102 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 SCRN3Q0VDG4 424 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 PABPC1L2AQ5JQF8 200 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 LRRC75A-AS1Q8N1F1 130 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 SLC30A7Q8NEW0 376 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 TSSK2Q96PF2 358 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 ZNF442Q9H7R0 627 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 LAMP3Q9UQV4 416 aa22.32■■□□□ 1.16
TRIM28-204ENST00000594806 ARID1AO14497 2285 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 DCTN6O00399 190 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 SNAP29O95721 258 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms