RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 UCP2P55851 309 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 CYB5R2Q6BCY4 276 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 ALDH16A1Q8IZ83 802 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 DEFB107AQ8IZN7 70 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 CPEB3Q8NE35 698 aaKnown RBP13.12□□□□□ -0.31
TRIM28-203ENST00000593582 UBASH3BQ8TF42 649 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 C11orf40Q8WZ69 217 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 DHRS1Q96LJ7 313 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 ZNF570Q96NI8 536 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 BPESC1Q9GZL8 116 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 OR51B6Q9H340 312 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 GPR160Q9UJ42 338 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 AURKCQ9UQB9 309 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 SIGLEC7Q9Y286 467 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 TIMM10BQ9Y5J6 103 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 JMJD1CQ15652 2540 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 ABCA2Q9BZC7 2435 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 SVEP1Q4LDE5 3571 aa13.12□□□□□ -0.31
TRIM28-203ENST00000593582 PRSS37A4D1T9 235 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 H7C1C5 153 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 STAMBPO95630 424 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 SEMG1P04279 462 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 CST2P09228 141 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 ZNF26P17031 533 aaPredicted RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 MSR1P21757 451 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 GIFP27352 417 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 OMPP47874 163 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 LIMS1P48059 325 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 GZMKP49863 264 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 GDI2P50395 445 aaKnown RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 KLF3P57682 345 aaPredicted RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 LCN6P62502 163 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 MAD2L1BPQ15013 274 aaPredicted RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 SEC23BQ15437 767 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 NKPD1Q17RQ9 610 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 GPR139Q6DWJ6 353 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 FAM122BQ7Z309 247 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 ZNF786Q8N393 782 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 ICA1LQ8NDH6 482 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 SYNPRQ8TBG9 265 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 RSRC1Q96IZ7 334 aaKnown RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 Q96M85 177 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
TRIM28-203ENST00000593582 MYEF2Q9P2K5 600 aaKnown RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 EIF3KQ9UBQ5 218 aaKnown RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 ANK3Q12955 4377 aaKnown RBP13.11□□□□□ -0.31
TRIM28-203ENST00000593582 IGHV4-61A0A0C4DH41 118 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 C5orf49A4QMS7 147 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 C12orf71A8MTZ7 269 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 PTP4A3O75365 173 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 GADD45GO95257 159 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 FABP3P05413 133 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 IGHV4-31P0DP07 118 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 NAT2P11245 290 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
TRIM28-203ENST00000593582 ZNF250P15622 560 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 SDHAP31040 664 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 PSG4Q00888 419 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 SPIBQ01892 262 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 KRR1Q13601 381 aaKnown RBP13.1□□□□□ -0.31
TRIM28-203ENST00000593582 MESTQ5EB52 335 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 FOXL2NBQ6ZUU3 175 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 PRIMA1Q86XR5 153 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 FITM2Q8N6M3 262 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 AKR7LQ8NHP1 331 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 POM121L2Q96KW2 1035 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 GPX7Q96SL4 187 aaPredicted RBP13.1□□□□□ -0.31
TRIM28-203ENST00000593582 OR2H1Q9GZK4 316 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 IL1RAPQ9NPH3 570 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 NRIP3Q9NQ35 241 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 POLE4Q9NR33 117 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 SLCO1C1Q9NYB5 712 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 TAAR3PQ9P1P4 343 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 IL20RAQ9UHF4 553 aa13.1□□□□□ -0.31
TRIM28-203ENST00000593582 SONP18583 2426 aaKnown RBP13.1□□□□□ -0.31
TRIM28-203ENST00000593582 TEX13CA0A0J9YWL9 993 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 CLPTM1O96005 669 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 ZNF23P17027 643 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 IFNGR2P38484 337 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 ERVS71-1P61550 626 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 MOGQ16653 247 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 DPY19L2P2Q6ZN68 376 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 SYT9Q86SS6 491 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 ADCK1Q86TW2 530 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 HIPK1Q86Z02 1210 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 OR1J1Q8NGS3 322 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 SNX33Q8WV41 574 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 RASD2Q96D21 266 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 FUZQ9BT04 418 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 WACQ9BTA9 647 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 ZNF416Q9BWM5 594 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 WNT5BQ9H1J7 359 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 TMCC3Q9ULS5 477 aa13.09□□□□□ -0.31
TRIM28-203ENST00000593582 IGLV3-9A0A075B6K5 115 aa13.08□□□□□ -0.32
TRIM28-203ENST00000593582 LOC100509620A0A075B734 347 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms