RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 FLVCR2Q9UPI3 526 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SLC17A4Q9Y2C5 497 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 TRBV23OR9-2A0A075B6M9 112 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 TMEM269A0A1B0GVZ9 245 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CIB4A0PJX0 185 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 DCDC2BA2VCK2 349 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C11orf98E9PRG8 122 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 LDB3O75112 727 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 MED6O75586 246 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RAD51DO75771 328 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SCO1O75880 301 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 TIMP1P01033 207 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 NMBP08949 121 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 FGF2P09038 288 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SELENOPP49908 381 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 AFF3P51826 1226 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF133P52736 654 aaPredicted RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 CLDN12P56749 244 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RPL27P61353 136 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 SLC17A1Q14916 467 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CEBPEQ15744 281 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 NKPD1Q17RQ9 610 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C1orf189Q5VU69 101 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 TCEAL6Q6IPX3 200 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 FAM111BQ6SJ93 734 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF793Q6ZN11 406 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 DPY19L4Q7Z388 723 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR2W3Q7Z3T1 314 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SULF2Q8IWU5 870 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ETFBKMTQ8IXQ9 262 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C15orf54Q8N8G6 183 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF565Q8N9K5 539 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR5L2Q8NGL0 311 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CAPNS2Q96L46 248 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 LINC00052Q96N35 136 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C12orf57Q99622 126 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 GAL3ST1Q99999 423 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SEC11CQ9BY50 192 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CNTNAP3Q9BZ76 1288 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR10A5Q9H207 317 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SEMA6CQ9H3T2 930 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RAB18Q9NP72 206 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RASL12Q9NYN1 266 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 KLK11Q9UBX7 282 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 PURGQ9UJV8 347 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 ICAM5Q9UMF0 924 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CCL26Q9Y258 94 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 LOC100509620A0A075B734 347 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 NPIPA5A0A0B4J1W7 369 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 A0A0B4J293 547 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 A0A0B4J2A0 478 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 TMEM218A2RU14 115 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 BTBD17A6NE02 478 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 A8MVM7 634 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 NPIPA7E9PJI5 369 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 K7ESM1 405 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CDC42EP2O14613 210 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ADAM10O14672 748 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 KLF4O43474 513 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SLC16A7O60669 478 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 GALR3O60755 368 aaPredicted RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 LILRB5O75023 590 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 PRKRAO75569 313 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 CTAG2O75638 210 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 SIX6O95475 246 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 DIRAS3O95661 229 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 WNT11O96014 354 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 IFNA5P01569 189 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 NPIPA8P0DM63 369 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF250P15622 560 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 CEBPBP17676 345 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ITGA3P26006 1051 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 GDI1P31150 447 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 GALNSP34059 522 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF84P51523 738 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 POLR2GP62487 172 aaKnown RBP eCLIP3.22□□□□□ -1.89
VMP1-216ENST00000592790 EFNB1P98172 346 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 PJVKQ0ZLH3 352 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 PMPCAQ10713 525 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF266Q14584 549 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C2orf76Q3KRA6 126 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 GLYATL3Q5SZD4 288 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 FAM27D1Q5T7N8 215 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF425Q6IV72 752 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF529Q6P280 563 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C17orf107Q6ZR85 190 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 ZNF283Q8N7M2 679 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C17orf47Q8NEP4 570 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 TERB2Q8NHR7 220 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 EMG1Q92979 244 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 SGK3Q96BR1 496 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 RAB3CQ96E17 227 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 WDR89Q96FK6 387 aaPredicted RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR8B4Q96RC9 309 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 USB1Q9BQ65 265 aaKnown RBP3.22□□□□□ -1.89
VMP1-216ENST00000592790 EDEM2Q9BV94 578 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 NMES1Q9C002 83 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 OR8D2Q9GZM6 311 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 C1orf198Q9H425 327 aa3.22□□□□□ -1.89
VMP1-216ENST00000592790 MYEF2Q9P2K5 600 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms