RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	SLC19A3	Q9BZV2	496 aa		15.43	■□□□□ 0.06
CIRBP-238	ENST00000592412	PCDHAC1	Q9H158	963 aa		15.43	■□□□□ 0.06
CIRBP-238	ENST00000592412	UNKL	Q9H9P5	680 aa	Known RBP	15.43	■□□□□ 0.06
CIRBP-238	ENST00000592412	SIAE	Q9HAT2	523 aa		15.43	■□□□□ 0.06
CIRBP-238	ENST00000592412	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	15.43	■□□□□ 0.06
CIRBP-238	ENST00000592412	NUP50	Q9UKX7	468 aa		15.43	■□□□□ 0.06
CIRBP-238	ENST00000592412	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	15.43	■□□□□ 0.06
CIRBP-238	ENST00000592412	C5orf49	A4QMS7	147 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	TRAPPC13	A5PLN9	417 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	BLOC1S5-TXNDC5	H3BN57	136 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	NGF	P01138	241 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	CD55	P08174	381 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	UMPS	P11172	480 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	ACADS	P16219	412 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	GCH1	P30793	250 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	IDH3A	P50213	366 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	CRYBA2	P53672	197 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	PSG4	Q00888	419 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	ARMC4	Q5T2S8	1044 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	MSL2	Q9HCI7	577 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	PLEK2	Q9NYT0	353 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	CORO2B	Q9UQ03	480 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	NPTN	Q9Y639	398 aa		15.42	■□□□□ 0.06
CIRBP-238	ENST00000592412	PLSCR5	A0PG75	271 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	EVPLL	A8MZ36	301 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	CENPBD1	B2RD01	187 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	POLR3G	O15318	223 aa	Predicted RBP	15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	ICMT	O60725	284 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	FOXH1	O75593	365 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	RNASE1	P07998	156 aa	Known RBP	15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	TSPAN19	P0C672	248 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	ZNF12	P17014	697 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	SLC3A1	Q07837	685 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	ZNF154	Q13106	437 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	ARMCX4	Q5H9R4	360 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	C11orf65	Q8NCR3	313 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	PFN4	Q8NHR9	129 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	ST7L	Q8TDW4	575 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	HDAC2	Q92769	488 aa	Known RBP	15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	TAMM41	Q96BW9	452 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	MPP4	Q96JB8	637 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	WNT5B	Q9H1J7	359 aa		15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412	SOX21	Q9Y651	276 aa	Predicted RBP	15.41	■□□□□ 0.06
CIRBP-238	ENST00000592412		A0A1W2PRG6	482 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	MCIDAS	D6RGH6	385 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	IGHM	P01871	453 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	HIST1H2AB	P04908	130 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	AQP2	P41181	271 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	ATP4B	P51164	291 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	MTPN	P58546	118 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	MAGOH	P61326	146 aa	Known RBP	15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	ERVK-25	P63136	954 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	AGK	Q53H12	422 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	RBMS3	Q6XE24	437 aa	Known RBP	15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	HIST3H2A	Q7L7L0	130 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	TREML1	Q86YW5	311 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	MOSPD2	Q8NHP6	518 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	ABHD4	Q8TB40	342 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	HIST1H2AC	Q93077	130 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	TLCD1	Q96CP7	247 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	DCLRE1C	Q96SD1	692 aa	Known RBP	15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	EGLN1	Q9GZT9	426 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	PATZ1	Q9HBE1	687 aa	Known RBP	15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	CCNB1IP1	Q9NPC3	277 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	C20orf141	Q9NUB4	165 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	EGFL7	Q9UHF1	273 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	INSIG2	Q9Y5U4	225 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412	AUP1	Q9Y679	476 aa		15.4	■□□□□ 0.06
CIRBP-238	ENST00000592412		A8MXK9	166 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412		F5H0A9	414 aa	Predicted RBP	15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	MT-ND1	P03886	318 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	SBK2	P0C263	348 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	FUT1	P19526	365 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	SLC6A9	P48067	706 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	GDI2	P50395	445 aa	Known RBP	15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	PPP1CB	P62140	327 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	BAMBI	Q13145	260 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	SLC25A47	Q6Q0C1	308 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	NKAIN4	Q8IVV8	208 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	CLDN22	Q8N7P3	220 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	C7orf26	Q96N11	449 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	SIGLEC11	Q96RL6	698 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	OR2H1	Q9GZK4	316 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	POFUT1	Q9H488	388 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	ZMAT3	Q9HA38	289 aa	Known RBP	15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	SMURF2	Q9HAU4	748 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	INIP	Q9NRY2	104 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	CYSLTR2	Q9NS75	346 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	NKIRAS1	Q9NYS0	192 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	ZDHHC8	Q9ULC8	765 aa		15.39	■□□□□ 0.05
CIRBP-238	ENST00000592412	OR7A10	O76100	309 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	TGDS	O95455	350 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	DAP3	P51398	398 aa	Known RBP	15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	PSG7	Q13046	419 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	CDK5R2	Q13319	367 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	ZMYND11	Q15326	602 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	SLC9A3R2	Q15599	337 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	SGCA	Q16586	387 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	CYP51A1	Q16850	503 aa		15.38	■□□□□ 0.05
CIRBP-238	ENST00000592412	FAM27B	Q5VT28	67 aa		15.38	■□□□□ 0.05

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