RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 MBD3L3A6NE82 208 aaPredicted RBP21.88■■□□□ 1.09
RFX1-205ENST00000589239 MBD3L5A6NJ08 208 aaPredicted RBP21.88■■□□□ 1.09
RFX1-205ENST00000589239 CENPBD1B2RD01 187 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 SS18L1O75177 396 aaPredicted RBP21.88■■□□□ 1.09
RFX1-205ENST00000589239 IGHV3-9P01782 118 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 MRPL3P09001 348 aaKnown RBP21.88■■□□□ 1.09
RFX1-205ENST00000589239 CENPAP49450 140 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 ZNF511Q8NB15 262 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 OR4F15Q8NGB8 312 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 MBD3L2Q8NHZ7 208 aaPredicted RBP21.88■■□□□ 1.09
RFX1-205ENST00000589239 NDNFQ8TB73 568 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 ALKBH3Q96Q83 286 aaPredicted RBP21.88■■□□□ 1.09
RFX1-205ENST00000589239 TP63Q9H3D4 680 aaPredicted RBP21.88■■□□□ 1.09
RFX1-205ENST00000589239 C12orf49Q9H741 205 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 FKBP14Q9NWM8 211 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 SH3BGRL2Q9UJC5 107 aa21.88■■□□□ 1.09
RFX1-205ENST00000589239 COL6A6A6NMZ7 2263 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 TOXO94900 526 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 PPP5CP53041 499 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 ST3GAL4Q11206 333 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 OTPQ5XKR4 325 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 DYNC2LI1Q8TCX1 351 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 TM9SF2Q99805 663 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 RACGAP1Q9H0H5 632 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 ERVK-18Q9QC07 812 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 MOKQ9UQ07 419 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 PMF1-BGLAPU3KQ54 211 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 SHANK1Q9Y566 2161 aa21.87■■□□□ 1.09
RFX1-205ENST00000589239 ATXN7O15265 892 aaPredicted RBP21.86■■□□□ 1.09
RFX1-205ENST00000589239 ADRA2AP08913 450 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 CD40LGP29965 261 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 C21orf33P30042 268 aaPredicted RBP21.86■■□□□ 1.09
RFX1-205ENST00000589239 ATP6V1E1P36543 226 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 SIRPAP78324 504 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 IFITM2Q01629 132 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 TSPO2Q5TGU0 170 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 DNM1P34Q6PK57 102 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 FAM214BQ7L5A3 538 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 ST6GALNAC3Q8NDV1 305 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 CNOT2Q9NZN8 540 aaKnown RBP21.86■■□□□ 1.09
RFX1-205ENST00000589239 ZFYVE26Q68DK2 2539 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 EFCAB10A6NFE3 127 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 STSP08842 583 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 PER3P56645 1201 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 FOXF2Q12947 444 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 GUSBP1Q15486 140 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 OR2A2Q6IF42 318 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 SLC25A47Q6Q0C1 308 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 PRSS48Q7RTY5 328 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 SMAP2Q8WU79 429 aaPredicted RBP21.86■■□□□ 1.09
RFX1-205ENST00000589239 IPCEF1Q8WWN9 437 aaPredicted RBP21.86■■□□□ 1.09
RFX1-205ENST00000589239 ULBP2Q9BZM5 246 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 MRPS18AQ9NVS2 196 aaKnown RBP21.86■■□□□ 1.09
RFX1-205ENST00000589239 HAO2Q9NYQ3 351 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 RELNP78509 3460 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 DOCK7Q96N67 2140 aa21.86■■□□□ 1.09
RFX1-205ENST00000589239 TVP23AA6NH52 213 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 KHDRBS3O75525 346 aaKnown RBP21.85■■□□□ 1.09
RFX1-205ENST00000589239 PIPP12273 146 aaPredicted RBP21.85■■□□□ 1.09
RFX1-205ENST00000589239 EMX1Q04741 257 aaPredicted RBP21.85■■□□□ 1.09
RFX1-205ENST00000589239 RAB40BQ12829 278 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 LCN1P1Q5VSP4 162 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 CNEP1R1Q8N9A8 125 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 OR52I1Q8NGK6 324 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 APH1AQ96BI3 265 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 YIPF6Q96EC8 236 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 ZNF837Q96EG3 531 aaPredicted RBP21.85■■□□□ 1.09
RFX1-205ENST00000589239 CCDC90BQ9GZT6 254 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 SLCO5A1Q9H2Y9 848 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 ADGRL4Q9HBW9 690 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 HLA-DQA2P01906 255 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 HOXD4P09016 255 aaPredicted RBP21.85■■□□□ 1.09
RFX1-205ENST00000589239 NR2C1P13056 603 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 NAA10P41227 235 aaPredicted RBP21.85■■□□□ 1.09
RFX1-205ENST00000589239 GLO1Q04760 184 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 LINGO2Q7L985 606 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 ZNF100Q8IYN0 542 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 GPR137CQ8N3F9 429 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 STX19Q8N4C7 294 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 RORBQ92753 470 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 ZNF486Q96H40 463 aaPredicted RBP21.85■■□□□ 1.09
RFX1-205ENST00000589239 CRLF2Q9HC73 371 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 POLE4Q9NR33 117 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 SLC7A10Q9NS82 523 aa21.85■■□□□ 1.09
RFX1-205ENST00000589239 SELENOFO60613 162 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 MPZL1O95297 269 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 KIR2DL2P43627 348 aaPredicted RBP21.84■■□□□ 1.09
RFX1-205ENST00000589239 GGTLC2Q14390 218 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 KLHL22Q53GT1 634 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.84■■□□□ 1.09
RFX1-205ENST00000589239 NAXEQ8NCW5 288 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 DACH2Q96NX9 599 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 TTYH2Q9BSA4 534 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 EMC9Q9Y3B6 208 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 FREM1Q5H8C1 2179 aa21.84■■□□□ 1.09
RFX1-205ENST00000589239 RGS10O43665 173 aa21.83■■□□□ 1.09
RFX1-205ENST00000589239 CDK1P06493 297 aa21.83■■□□□ 1.09
RFX1-205ENST00000589239 SBK2P0C263 348 aa21.83■■□□□ 1.09
RFX1-205ENST00000589239 P2RY8Q86VZ1 359 aa21.83■■□□□ 1.09
RFX1-205ENST00000589239 HTRA1Q92743 480 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms