RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 ENTPD1P49961 510 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 ACTC1P68032 377 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 ACTA1P68133 377 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 NCCRP1Q6ZVX7 275 aaPredicted RBP12.78□□□□□ -0.36
NPC1-207ENST00000588867 LRRC18Q8N456 261 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 THEM6Q8WUY1 208 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 ZFP3Q96NJ6 502 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 POLE4Q9NR33 117 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 PROCRQ9UNN8 238 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 POLR1DQ9Y2S0 133 aa12.78□□□□□ -0.36
NPC1-207ENST00000588867 MYL12BO14950 172 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 HRGP04196 525 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 CRHP06850 196 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 LIMS3P0CW19 117 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 LIMS4P0CW20 117 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.37
NPC1-207ENST00000588867 FOXG1P55316 489 aaPredicted RBP12.77□□□□□ -0.37
NPC1-207ENST00000588867 TUBA4AP68366 448 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
NPC1-207ENST00000588867 TFAP2EQ6VUC0 442 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 ABHD12BQ7Z5M8 362 aaPredicted RBP12.77□□□□□ -0.37
NPC1-207ENST00000588867 ATCAYQ86WG3 371 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 LINC00346Q8IVM7 164 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 RFLNBQ8N5W9 214 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 STARD4Q96DR4 205 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 FOXB1Q99853 325 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 YIPF3Q9GZM5 350 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 NELFAQ9H3P2 528 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 VCX3AQ9NNX9 186 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 ACOT13Q9NPJ3 140 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 KCNG2Q9UJ96 466 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 COPS3Q9UNS2 423 aa12.77□□□□□ -0.37
NPC1-207ENST00000588867 INTS1Q8N201 2190 aaKnown RBP12.76□□□□□ -0.37
NPC1-207ENST00000588867 ZNF670-ZNF695F2Z2N8 137 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 TMCC2O75069 709 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 PSKH1P11801 424 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 B4GALT1P15291 398 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 MSR1P21757 451 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 CTSSP25774 331 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 ARF1P84077 181 aaKnown RBP12.76□□□□□ -0.37
NPC1-207ENST00000588867 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
NPC1-207ENST00000588867 IRF3Q14653 427 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 MED22Q15528 200 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 OR2G6Q5TZ20 316 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 CORO6Q6QEF8 472 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 SSX6Q7RTT6 188 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 CDC20BQ86Y33 519 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 ALG8Q9BVK2 526 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 PLSCR4Q9NRQ2 329 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 INPP5EQ9NRR6 644 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 TMEM38BQ9NVV0 291 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 ZNF99A8MXY4 864 aaPredicted RBP12.76□□□□□ -0.37
NPC1-207ENST00000588867 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 PTHP01270 115 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 NPR2P20594 1047 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 PCMT1P22061 227 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 MRPS34P82930 218 aaKnown RBP12.76□□□□□ -0.37
NPC1-207ENST00000588867 ZNF85Q03923 595 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 EIF2B1Q14232 305 aaKnown RBP12.76□□□□□ -0.37
NPC1-207ENST00000588867 ZNF813Q6ZN06 617 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 NANOGP1Q8N7R0 232 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 ZNF610Q8N9Z0 462 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 OTOSQ8NHW6 89 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 SNX33Q8WV41 574 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 MND1Q9BWT6 205 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 OPN3Q9H1Y3 402 aaPredicted RBP12.76□□□□□ -0.37
NPC1-207ENST00000588867 SIAEQ9HAT2 523 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 MALT1Q9UDY8 824 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 KLHDC2Q9Y2U9 406 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 TMEM14AQ9Y6G1 99 aa12.76□□□□□ -0.37
NPC1-207ENST00000588867 A0A0G2JNJ9 132 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 TRIM64CA6NLI5 447 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 E9PLN8 166 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 PSMD9O00233 223 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 MAGEB4O15481 346 aaPredicted RBP12.75□□□□□ -0.37
NPC1-207ENST00000588867 LCKP06239 509 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 ALOX5APP20292 161 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 CD79BP40259 229 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 CA7P43166 264 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 GALEQ14376 348 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 TBCEQ15813 527 aaPredicted RBP12.75□□□□□ -0.37
NPC1-207ENST00000588867 KCNMB1Q16558 191 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 RNLSQ5VYX0 342 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 XAF1Q6GPH4 301 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 SLC18B1Q6NT16 456 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 FOXL2NBQ6ZUU3 175 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 SPATC1Q76KD6 591 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 SLC22A24Q8N4F4 322 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 KLHL36Q8N4N3 616 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 OR2AJ1Q8NGZ0 328 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 GATAD2BQ8WXI9 593 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 RORBQ92753 470 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 NABP1Q96AH0 204 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 VKORC1Q9BQB6 163 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 ZNF649Q9BS31 505 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 ZNF416Q9BWM5 594 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 SFXN3Q9BWM7 321 aa12.75□□□□□ -0.37
NPC1-207ENST00000588867 JAM3Q9BX67 310 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms