RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SF3B6Q9Y3B4 125 aaKnown RBP23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 PNMA8CA0A1B0GUJ8 204 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 PHYHO14832 338 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 DHHO43323 396 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 UPK3AO75631 287 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 ABHD16AO95870 558 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 ZNF823P16415 610 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 KCNMB1Q16558 191 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 FGD2Q7Z6J4 655 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 EGFL6Q8IUX8 553 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 ZNF454Q8N9F8 522 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 THEM6Q8WUY1 208 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 ULBP2Q9BZM5 246 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 TUBD1Q9UJT1 453 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 GNG8Q9UK08 70 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 CLEC4AQ9UMR7 237 aa23.01■■□□□ 1.27
SCAMP4-210ENST00000588555 OR14I1A6ND48 311 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 PSMD9O00233 223 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 LRRTM2O43300 516 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 AIREO43918 545 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 CELP19835 753 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 PCSK6P29122 969 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 EGR3Q06889 387 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 SLC18B1Q6NT16 456 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 RNF166Q96A37 237 aaPredicted RBP23■■□□□ 1.27
SCAMP4-210ENST00000588555 GPR137Q96N19 417 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 MYCBPQ99417 103 aaPredicted RBP23■■□□□ 1.27
SCAMP4-210ENST00000588555 SEC61A2Q9H9S3 476 aa23■■□□□ 1.27
SCAMP4-210ENST00000588555 PHF3Q92576 2039 aaKnown RBP23■■□□□ 1.27
SCAMP4-210ENST00000588555 YES1P07947 543 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 EDNRAP25101 427 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 ZNF324BQ6AW86 544 aaPredicted RBP22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 RPTNQ6XPR3 784 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 PLEKHG7Q6ZR37 379 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 LINGO2Q7L985 606 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 KCTD20Q7Z5Y7 419 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 ASB17Q8WXJ9 295 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 ZNF837Q96EG3 531 aaPredicted RBP22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 ABHD6Q9BV23 337 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 POLE4Q9NR33 117 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 CYB5R1Q9UHQ9 305 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 GRIP1Q9Y3R0 1128 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 MAP1BP46821 2468 aaKnown RBP22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 MRPL33O75394 65 aaKnown RBP22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 SULT1C4O75897 302 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 OR8G3PP0DMU2 310 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 CRYBB2P43320 205 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 TAS2R43P59537 309 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 LSM3P62310 102 aaKnown RBP22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 GPR50Q13585 617 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 RIPPLY2Q5TAB7 128 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 ST7LQ8TDW4 575 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 HTRA1Q92743 480 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 CALHM2Q9HA72 323 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 EMC7Q9NPA0 242 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 PARPBPQ9NWS1 579 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 ST6GALNAC2Q9UJ37 374 aa22.99■■□□□ 1.27
SCAMP4-210ENST00000588555 METTL15A6NJ78 407 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 GPX5O75715 221 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 FCGR2AP12318 317 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 NCS1P62166 190 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 ROM1Q03395 351 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 EIF2B1Q14232 305 aaKnown RBP22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 SPCS2Q15005 226 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 SOWAHCQ53LP3 525 aaPredicted RBP22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 LINC00346Q8IVM7 164 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 OR10H5Q8NGA6 315 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 NABP1Q96AH0 204 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 ALKBH3Q96Q83 286 aaPredicted RBP22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 OR8B4Q96RC9 309 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 TTYH2Q9BSA4 534 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 GP6Q9HCN6 339 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 SLCO1C1Q9NYB5 712 aa22.98■■□□□ 1.27
SCAMP4-210ENST00000588555 CACNA1CQ13936 2221 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 WNT11O96014 354 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 PSMA1P25786 263 aaKnown RBP22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 HOXD11P31277 338 aaPredicted RBP22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 GABRA5P31644 462 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 VBP1P61758 197 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 RPS25P62851 125 aaKnown RBP22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 TIMM50Q3ZCQ8 353 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 DMKNQ6E0U4 476 aaPredicted RBP22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 FAM180AQ6UWF9 173 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 MCEMP1Q8IX19 187 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 GPR137CQ8N3F9 429 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 OR5M9Q8NGP3 310 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 CHCHD6Q9BRQ6 235 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 CRLF2Q9HC73 371 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 LHFPL6Q9Y693 200 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 ITPR1Q14643 2758 aa22.97■■□□□ 1.27
SCAMP4-210ENST00000588555 A0A1W2PPW3 197 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 SLC22A1O15245 554 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 PLPP2O43688 288 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 KRT8P05787 483 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 GBX2P52951 348 aaPredicted RBP22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 SIRPAP78324 504 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 TSPO2Q5TGU0 170 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 LIPNQ5VXI9 398 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 DCXRQ7Z4W1 244 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms