RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 EIF3KQ9UBQ5 218 aaKnown RBP12.26□□□□□ -0.45
TPM4-205ENST00000586833 LAMP3Q9UQV4 416 aa12.26□□□□□ -0.45
TPM4-205ENST00000586833 UGT2A1Q9Y4X1 527 aa12.26□□□□□ -0.45
TPM4-205ENST00000586833 PMF1-BGLAPU3KQ54 211 aa12.26□□□□□ -0.45
TPM4-205ENST00000586833 IGHV2OR16-5A0A0B4J2B6 119 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 BHLHE40O14503 412 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 SOX14O95416 240 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 HLA-DQA2P01906 255 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 ZNF14P17017 642 aaPredicted RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 TTKP33981 857 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 GRK5P34947 590 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 CDKN2AP42771 156 aaKnown RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 GDI2P50395 445 aaKnown RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 SELENOVP59797 346 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 LSM6P62312 80 aaKnown RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 SNRPD2P62316 118 aaKnown RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 GABPB1Q06547 395 aaPredicted RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 SPOCK1Q08629 439 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 DAG1Q14118 895 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 RAB39AQ14964 217 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 KPNB1Q14974 876 aaKnown RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 SLC35F1Q5T1Q4 408 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 C1orf174Q8IYL3 243 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 SDR9C7Q8NEX9 313 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 NABP1Q96AH0 204 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 CENPNQ96H22 339 aaPredicted RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 PLEKHA8Q96JA3 519 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 NIPSNAP1Q9BPW8 284 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 CDADC1Q9BWV3 514 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 NUAK2Q9H093 628 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 ZNF442Q9H7R0 627 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 RPRD1BQ9NQG5 326 aaKnown RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 CA10Q9NS85 328 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 CBLN4Q9NTU7 201 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 KCNG2Q9UJ96 466 aa12.25□□□□□ -0.45
TPM4-205ENST00000586833 NDRG4Q9ULP0 352 aaKnown RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 COA3Q9Y2R0 106 aaPredicted RBP12.25□□□□□ -0.45
TPM4-205ENST00000586833 NBPF19A0A087WUL8 3843 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 IGKV1D-43A0A0B4J1Z2 117 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 E7EQL1 145 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 ERCC1P07992 297 aaPredicted RBP12.24□□□□□ -0.45
TPM4-205ENST00000586833 CTLA4P16410 223 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 ZNF823P16415 610 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 ZNF32P17041 273 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 RAD52P43351 418 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 NOTCH2Q04721 2471 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 AQP6Q13520 282 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 PGGHGQ32M88 737 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 PABPC1L2AQ5JQF8 200 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 SHEQ5VZ18 495 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 PTCHD4Q6ZW05 846 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 PROKR2Q8NFJ6 384 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 LILRB1Q8NHL6 650 aaPredicted RBP12.24□□□□□ -0.45
TPM4-205ENST00000586833 NEUROG1Q92886 237 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 STMN2Q93045 179 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 BARX1Q9HBU1 254 aaPredicted RBP12.24□□□□□ -0.45
TPM4-205ENST00000586833 SRA1Q9HD15 236 aaKnown RBP12.24□□□□□ -0.45
TPM4-205ENST00000586833 ZNF224Q9NZL3 707 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 B9D1Q9UPM9 204 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 CMAHPQ9Y471 501 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 ORC6Q9Y5N6 252 aa12.24□□□□□ -0.45
TPM4-205ENST00000586833 ZNF503-AS2A6NEH8 195 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 B9A039 149 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 SNAP29O95721 258 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 CELA3BP08861 270 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 MMP7P09237 267 aaPredicted RBP12.23□□□□□ -0.45
TPM4-205ENST00000586833 PATE4P0C8F1 98 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 COX5BP10606 129 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 STOMP27105 288 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 SERPINF1P36955 418 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 ESRRGP62508 458 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 SNTB2Q13425 540 aaKnown RBP12.23□□□□□ -0.45
TPM4-205ENST00000586833 VHLLQ6RSH7 139 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 ZBTB46Q86UZ6 589 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 PARP8Q8N3A8 854 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 OR2AJ1Q8NGZ0 328 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 IPCEF1Q8WWN9 437 aaPredicted RBP12.23□□□□□ -0.45
TPM4-205ENST00000586833 LRTOMTQ8WZ04 291 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 TRAF4Q9BUZ4 470 aaPredicted RBP12.23□□□□□ -0.45
TPM4-205ENST00000586833 ZNF416Q9BWM5 594 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 PLA2G12AQ9BZM1 189 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 GSX2Q9BZM3 304 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 OR2H1Q9GZK4 316 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 NOX3Q9HBY0 568 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 KRT84Q9NSB2 600 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 GPR160Q9UJ42 338 aa12.23□□□□□ -0.45
TPM4-205ENST00000586833 SGCEO43556 437 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 DANCRP0C864 163 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 ZNF35P13682 527 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 PAX1P15863 534 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 PRKACGP22612 351 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 CCNOP22674 350 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 NR4A1P22736 598 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 PCSK6P29122 969 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 CALCRP30988 508 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 GLRXP35754 106 aa12.22□□□□□ -0.45
TPM4-205ENST00000586833 SLC25A1P53007 311 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms