RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TEP1Q99973 2627 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-228ENST00000583363 EFCAB10A6NFE3 127 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 PTGES3LE9PB15 166 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 HLA-DQA2P01906 255 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 HRGP04196 525 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SBK2P0C263 348 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 NPR2P20594 1047 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MPGP29372 298 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MRPS34P82930 218 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 RAB40BQ12829 278 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF474Q6S9Z5 364 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 LYPD4Q6UWN0 246 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 Q6ZT83 130 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FJX1Q86VR8 437 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TIGD4Q8IY51 512 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF540Q8NDQ6 660 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SLC26A10Q8NG04 563 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 IPCEF1Q8WWN9 437 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 C11orf40Q8WZ69 217 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ADGRL4Q9HBW9 690 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 POLE4Q9NR33 117 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TMEM38BQ9NVV0 291 aa14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CNOT2Q9NZN8 540 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-228ENST00000583363 A0A1W2PPL8 197 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 IRGMA1A4Y4 181 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 A8MXE2 369 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF99A8MXY4 864 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 J3QRE1 110 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF593O00488 134 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 DVL2O14641 736 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MSTNO14793 375 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 LRRTM2O43300 516 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ITGA5P08648 1049 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 PIPP12273 146 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 BMP5P22003 454 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 IGHV1-2P23083 117 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 GUCA1AP43080 201 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SLC35A2P78381 396 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ARF1P84077 181 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ADORA2A-AS1P86434 159 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 POU4F2Q12837 409 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SGCAQ16586 387 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TEX30Q5JUR7 227 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 BEND4Q6ZU67 534 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF627Q7L945 461 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SLC16A9Q7RTY1 509 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 GABRG1Q8N1C3 465 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 OR4F15Q8NGB8 312 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 OR51G2Q8NGK0 314 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 OR52I1Q8NGK6 324 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 NABP1Q96AH0 204 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FOXB1Q99853 325 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 RHNO1Q9BSD3 238 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 WDR76Q9H967 626 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SIAEQ9HAT2 523 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FGF20Q9NP95 211 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 PAK1IP1Q9NWT1 392 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 JKAMPQ9P055 326 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 BLOC1S6Q9UL45 172 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SLC5A6Q9Y289 635 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ABCA12Q86UK0 2595 aa14.36□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TRIM64A6NGJ6 449 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SELENOFO60613 162 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 APOL3O95236 402 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MRPL3P09001 348 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF823P16415 610 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ATP6V1E1P36543 226 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SH3BGRP55822 239 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 LSM6P62312 80 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ST3GAL4Q11206 333 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MEP1BQ16820 701 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 PCK2Q16822 640 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 NRN1LQ496H8 165 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FAM27BQ5VT28 67 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 C9orf135Q5VTT2 229 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 OTPQ5XKR4 325 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ERI1Q8IV48 349 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 SGCDQ92629 289 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MYDGFQ969H8 173 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CCDC120Q96HB5 630 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TMEM80Q96HE8 168 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 INTS14Q96SY0 518 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CNN2Q99439 309 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 NELFAQ9H3P2 528 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 PCDHGB1Q9Y5G3 927 aa14.35□□□□□ -0.11
CDK5RAP3-228ENST00000583363 TNFAIP8O95379 198 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 FADS2O95864 444 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 CDK1P06493 297 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ADRA2AP08913 450 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 COX5AP20674 150 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MSR1P21757 451 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 DCKP27707 260 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 NAA10P41227 235 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ENTPD1P49961 510 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 HCCSP53701 268 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 GABARAPL2P60520 117 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 P2RY6Q15077 328 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 KCTD21Q4G0X4 260 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 MTFR2Q6P444 385 aa14.34□□□□□ -0.11
CDK5RAP3-228ENST00000583363 ZNF813Q6ZN06 617 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms