RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.12□□□□□ -0.95
CCDC47-203ENST00000580986 CPOQ8IVL8 374 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 ENTHD1Q8IYW4 607 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 C8orf59Q8N0T1 100 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-203ENST00000580986 SLC22A24Q8N4F4 322 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 CYB561A3Q8NBI2 242 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 SLC26A10Q8NG04 563 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 FBLIM1Q8WUP2 373 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 CYGBQ8WWM9 190 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 BCL2L2Q92843 193 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-203ENST00000580986 NABP1Q96AH0 204 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF837Q96EG3 531 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-203ENST00000580986 Q96MT0 163 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 POLE4Q9NR33 117 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 AMDHD2Q9Y303 409 aa9.12□□□□□ -0.95
CCDC47-203ENST00000580986 CIB4A0PJX0 185 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 FAM183AA6NL82 134 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 LYZL6O75951 148 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 GOSR1O95249 250 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 CST2P09228 141 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 MSR1P21757 451 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 IL32P24001 234 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 HTR1FP30939 366 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 HOXC12P31275 282 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 FMO3P31513 532 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 FOXG1P55316 489 aaPredicted RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 ARF1P84077 181 aaKnown RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 FAM27E3Q08E93 113 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 POU4F2Q12837 409 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 MAD2L1BPQ15013 274 aaPredicted RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 TBRG1Q3YBR2 411 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF813Q6ZN06 617 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 RHOUQ7L0Q8 258 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 MEPCEQ7L2J0 689 aaKnown RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 PROKR2Q8NFJ6 384 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 NANOS1Q8WY41 292 aaKnown RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 HSD17B8Q92506 261 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 TSSK2Q96PF2 358 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 IL4I1Q96RQ9 567 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 TEAD3Q99594 435 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 HCAR1Q9BXC0 346 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 Q9H521 79 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 SLC17A5Q9NRA2 495 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF226Q9NYT6 803 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 H2AFY2Q9P0M6 372 aaPredicted RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 WARS2Q9UGM6 360 aaKnown RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 ATPIF1Q9UII2 106 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 FBXL3Q9UKT7 428 aa9.11□□□□□ -0.95
CCDC47-203ENST00000580986 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 COA3Q9Y2R0 106 aaPredicted RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 HELZ2Q9BYK8 2649 aaKnown RBP9.11□□□□□ -0.95
CCDC47-203ENST00000580986 NKX2-6A6NCS4 301 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 C12orf71A8MTZ7 269 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 RAD51DO75771 328 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 UBL3O95164 117 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 WNT11O96014 354 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 EPXP11678 715 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 MYF6P23409 242 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 CXCR4P61073 352 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 PCBD1P61457 104 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 CSNK2BP67870 215 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 AQP6Q13520 282 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 ETFDHQ16134 617 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 SLC36A2Q495M3 483 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 KLHL24Q6TFL4 600 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 THAP5Q7Z6K1 395 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 TIGD4Q8IY51 512 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 OR9Q1Q8NGQ5 310 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 NSMAFQ92636 917 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF582Q96NG8 517 aaPredicted RBP9.1□□□□□ -0.95
CCDC47-203ENST00000580986 DACH2Q96NX9 599 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 MNTQ99583 582 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 ACTR6Q9GZN1 396 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 SRA1Q9HD15 236 aaKnown RBP9.1□□□□□ -0.95
CCDC47-203ENST00000580986 MRPS18AQ9NVS2 196 aaKnown RBP9.1□□□□□ -0.95
CCDC47-203ENST00000580986 B3GNT2Q9NY97 397 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 ZNF224Q9NZL3 707 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 CRNNQ9UBG3 495 aaPredicted RBP9.1□□□□□ -0.95
CCDC47-203ENST00000580986 NDRG3Q9UGV2 375 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 SLC25A15Q9Y619 301 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 COMMD3-BMI1R4GMX3 469 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 COL12A1Q99715 3063 aa9.1□□□□□ -0.95
CCDC47-203ENST00000580986 TENM4Q6N022 2769 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 A0A1W2PPL8 197 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 CCDC182A6NF36 153 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 DENRO43583 198 aaKnown RBP9.09□□□□□ -0.95
CCDC47-203ENST00000580986 TMCC2O75069 709 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 WBP4O75554 376 aaKnown RBP9.09□□□□□ -0.95
CCDC47-203ENST00000580986 IGKV3-15P01624 115 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 TFP02787 698 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 GYPBP06028 91 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 MMP7P09237 267 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-203ENST00000580986 GNAO1P09471 354 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 CLUP10909 449 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 B4GALT1P15291 398 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 GSTT1P30711 240 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 ARR3P36575 388 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 CDH11P55287 796 aa9.09□□□□□ -0.95
CCDC47-203ENST00000580986 UBE2NP61088 152 aaKnown RBP9.09□□□□□ -0.95
CCDC47-203ENST00000580986 HIST1H3AP68431 136 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms