RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 FANCFQ9NPI8 374 aa3.43□□□□□ -1.86
DDX42-211ENST00000580108 YAE1D1Q9NRH1 226 aa3.43□□□□□ -1.86
DDX42-211ENST00000580108 MRPS18AQ9NVS2 196 aaKnown RBP3.43□□□□□ -1.86
DDX42-211ENST00000580108 ARMCX1Q9P291 453 aa3.43□□□□□ -1.86
DDX42-211ENST00000580108 LEF1Q9UJU2 399 aaPredicted RBP3.43□□□□□ -1.86
DDX42-211ENST00000580108 COL6A5A8TX70 2615 aa3.43□□□□□ -1.86
DDX42-211ENST00000580108 ARHGAP32A7KAX9 2087 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 A0A087WUJ7 227 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 IGKV1D-43A0A0B4J1Z2 117 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 IGHV2OR16-5A0A0B4J2B6 119 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 TMEM129A0AVI4 362 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 SH3PXD2BA1X283 911 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 EVPLLA8MZ36 301 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ZNF587BE7ETH6 402 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 J3KTA2 159 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 PLPP3O14495 311 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 IMPA2O14732 288 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 AIM2O14862 343 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ANGPT2O15123 496 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 HNRNPCP07910 306 aaKnown RBP eCLIP3.42□□□□□ -1.86
DDX42-211ENST00000580108 VIMP08670 466 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 NHLRC4P0CG21 123 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 CD79AP11912 226 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 CCL2P13500 99 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 UQCRBP14927 111 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 NCK1P16333 377 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ZNF43P17038 809 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 TCN1P20061 433 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 AHCYP23526 432 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 GTF2E2P29084 291 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 IL2RGP31785 369 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 PCGF2P35227 344 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 THBS4P35443 961 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 CAPZA2P47755 286 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ARFIP2P53365 341 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 NUDT6P53370 316 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 BIDP55957 195 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 PRPS1P60891 318 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ERVS71-1P61550 626 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 NCALDP61601 193 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 NAAAQ02083 359 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 POU3F1Q03052 451 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 PMS2P3Q13401 168 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 PIN1Q13526 163 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 C1DQ13901 141 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 RAB39AQ14964 217 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 MFSD13AQ14CX5 517 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 MAD2L1BPQ15013 274 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 ADIPOQQ15848 244 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 TRMT5Q32P41 509 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 ALKBH6Q3KRA9 238 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 LRRC23Q53EV4 343 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 NANOGP8Q6NSW7 305 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 HMBOX1Q6NT76 420 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 KLHL17Q6TDP4 642 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 PRSS57Q6UWY2 283 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ZNF813Q6ZN06 617 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 DEF8Q6ZN54 512 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 H1FNTQ75WM6 255 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 SLC46A3Q7Z3Q1 461 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 NET1Q7Z628 596 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 VTCN1Q7Z7D3 282 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 IGFN1Q86VF2 1251 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 LRP11Q86VZ4 500 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 CARM1Q86X55 608 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 NKAIN4Q8IVV8 208 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 UEVLDQ8IX04 471 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 SKA3Q8IX90 412 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 C20orf196Q8IYI0 205 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 MICU2Q8IYU8 434 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 CDK20Q8IZL9 346 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 FBXL14Q8N1E6 418 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 MUC15Q8N387 334 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 GPR137CQ8N3F9 429 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 SVOPLQ8N434 492 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 PAQR4Q8N4S7 273 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 DPP10Q8N608 796 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 CLDN22Q8N7P3 220 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ARIH2OSQ8N7S6 290 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 POMGNT2Q8NAT1 580 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 C11orf65Q8NCR3 313 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 MOSPD2Q8NHP6 518 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 ADAMTS16Q8TE57 1224 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 C10orf82Q8WW14 230 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 OIT3Q8WWZ8 545 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 SLC38A4Q969I6 547 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 RCN3Q96D15 328 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 SLC47A1Q96FL8 570 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 TRMT61AQ96FX7 289 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 SLC41A3Q96GZ6 507 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 FOXN4Q96NZ1 517 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 SLC38A2Q96QD8 506 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 SH3GL3Q99963 347 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 VRK1Q99986 396 aaPredicted RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 SF3B5Q9BWJ5 86 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 TPK1Q9H3S4 243 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 KAT8Q9H7Z6 458 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 NANOGQ9H9S0 305 aa3.42□□□□□ -1.86
DDX42-211ENST00000580108 CACYBPQ9HB71 228 aaKnown RBP3.42□□□□□ -1.86
DDX42-211ENST00000580108 TMEM27Q9HBJ8 222 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms