RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 ACBD7Q8N6N7 88 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 OR2T27Q8NH04 317 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 BOD1Q96IK1 185 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 FOXB1Q99853 325 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 RBM24Q9BX46 236 aaKnown RBP14.2□□□□□ -0.14
SS18-211ENST00000578954 WDR76Q9H967 626 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 UPB1Q9UBR1 384 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 ZNF629Q9UEG4 869 aaPredicted RBP14.2□□□□□ -0.14
SS18-211ENST00000578954 Q9UFV3 132 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 PROCRQ9UNN8 238 aa14.2□□□□□ -0.14
SS18-211ENST00000578954 EXOSC1Q9Y3B2 195 aaKnown RBP14.2□□□□□ -0.14
SS18-211ENST00000578954 KMT2BQ9UMN6 2715 aaPredicted RBP14.19□□□□□ -0.14
SS18-211ENST00000578954 C12orf71A8MTZ7 269 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 KRT33AO76009 404 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 MPZL1O95297 269 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 HLA-DQA2P01906 255 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 ITGA5P08648 1049 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 PSKH1P11801 424 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 COX5AP20674 150 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 MPGP29372 298 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 CDAP32320 146 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 OPRM1P35372 400 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 ATP6V1E1P36543 226 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 MRPL49Q13405 166 aaKnown RBP14.19□□□□□ -0.14
SS18-211ENST00000578954 TBCEQ15813 527 aaPredicted RBP14.19□□□□□ -0.14
SS18-211ENST00000578954 FAM27BQ5VT28 67 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 ATCAYQ86WG3 371 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 SPARTQ8N0X7 666 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 GABRG1Q8N1C3 465 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 ZNF454Q8N9F8 522 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 OR6N2Q8NGY6 317 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 OTOSQ8NHW6 89 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 FOXN4Q96NZ1 517 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 PIGMQ9H3S5 423 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 SIAEQ9HAT2 523 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 SH3BGRL2Q9UJC5 107 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 OSGIN2Q9Y236 505 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 NBASA2RRP1 2371 aa14.19□□□□□ -0.14
SS18-211ENST00000578954 B8ZZF3 427 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 LIMS3P0CW19 117 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 LIMS4P0CW20 117 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 ZNF823P16415 610 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 ALOX5APP20292 161 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 PCMT1P22061 227 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 FOXG1P55316 489 aaPredicted RBP14.18□□□□□ -0.14
SS18-211ENST00000578954 ADAM8P78325 824 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 ZNF85Q03923 595 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 FAPQ12884 760 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 ENDOGQ14249 297 aaKnown RBP14.18□□□□□ -0.14
SS18-211ENST00000578954 MEP1BQ16820 701 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 UBE2J2Q8N2K1 259 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 SVOPQ8N4V2 548 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 WACQ9BTA9 647 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 MRPS26Q9BYN8 205 aaKnown RBP14.18□□□□□ -0.14
SS18-211ENST00000578954 SEC61A2Q9H9S3 476 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 ERVK13-1Q9NX77 482 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 CYB5R1Q9UHQ9 305 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 COPS3Q9UNS2 423 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 TMEM14AQ9Y6G1 99 aa14.18□□□□□ -0.14
SS18-211ENST00000578954 A0A1W2PQL4 384 aaPredicted RBP14.17□□□□□ -0.14
SS18-211ENST00000578954 TMEM129A0AVI4 362 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 ZNF593O00488 134 aaPredicted RBP14.17□□□□□ -0.14
SS18-211ENST00000578954 MSTNO14793 375 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 PHYHO14832 338 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 CST2P09228 141 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 MYL12AP19105 171 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 IGHV1-2P23083 117 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 GUCA1AP43080 201 aaPredicted RBP14.17□□□□□ -0.14
SS18-211ENST00000578954 ETV1P50549 477 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 ARF1P84077 181 aaKnown RBP14.17□□□□□ -0.14
SS18-211ENST00000578954 TLE1Q04724 770 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 GALEQ14376 348 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 BEND4Q6ZU67 534 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 NCCRP1Q6ZVX7 275 aaPredicted RBP14.17□□□□□ -0.14
SS18-211ENST00000578954 DPY19L4Q7Z388 723 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 EGFL6Q8IUX8 553 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 ZNF843Q8N446 348 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 OR10H4Q8NGA5 316 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 OR10H5Q8NGA6 315 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 RND1Q92730 232 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 EMC7Q9NPA0 242 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 TAS2R16Q9NYV7 291 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 JKAMPQ9P055 326 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 KLHDC2Q9Y2U9 406 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 SNX5Q9Y5X3 404 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 LHFPL6Q9Y693 200 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 NCOA6Q14686 2063 aaPredicted RBP14.17□□□□□ -0.14
SS18-211ENST00000578954 KALRNO60229 2985 aa14.17□□□□□ -0.14
SS18-211ENST00000578954 ZNF670-ZNF695F2Z2N8 137 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 TMCC2O75069 709 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 C1QL1O75973 258 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 SPARCP09486 303 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 OR8G3PP0DMU2 310 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 B4GALT1P15291 398 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 HIST1H3AP68431 136 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 EMX1Q04741 257 aaPredicted RBP14.16□□□□□ -0.14
SS18-211ENST00000578954 P2RY6Q15077 328 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 SGCAQ16586 387 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 CDONQ4KMG0 1287 aa14.16□□□□□ -0.14
SS18-211ENST00000578954 SOWAHCQ53LP3 525 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms