RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 RPL13AP3Q6NVV1 102 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 ADGRG5Q8IZF4 528 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 IFT27Q9BW83 186 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 PLK3Q9H4B4 646 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 CDH20Q9HBT6 801 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 VSX1Q9NZR4 365 aaPredicted RBP20.3■□□□□ 0.84
SNF8-217ENST00000576353 SLC7A8Q9UHI5 535 aa20.3■□□□□ 0.84
SNF8-217ENST00000576353 DHRS12A0PJE2 317 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 TRIM64A6NGJ6 449 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 TRIM64BA6NI03 449 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 C12orf71A8MTZ7 269 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 GSC2O15499 205 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 IDH3BO43837 385 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 SLC16A7O60669 478 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 PPP1R3DO95685 299 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 INHBBP09529 407 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 ZNF32P17041 273 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 PABPC1L2AQ5JQF8 200 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 ZNF770Q6IQ21 691 aaPredicted RBP20.29■□□□□ 0.84
SNF8-217ENST00000576353 ZNF620Q6ZNG0 422 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 OR9Q2Q8NGE9 314 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 SAMD8Q96LT4 415 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 WACQ9BTA9 647 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 SYT4Q9H2B2 425 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 POLE4Q9NR33 117 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 TIMM10BQ9Y5J6 103 aa20.29■□□□□ 0.84
SNF8-217ENST00000576353 H7C1Q1 480 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 SSX4O60224 188 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 KHDRBS3O75525 346 aaKnown RBP20.28■□□□□ 0.84
SNF8-217ENST00000576353 SNAP29O95721 258 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 CST1P01037 141 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 GASTP01350 101 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 CTLA4P16410 223 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 NOS3P29474 1203 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 APLNRP35414 380 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 NUDT6P53370 316 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 MICAQ29983 383 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 SYT9Q86SS6 491 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 JAZF1Q86VZ6 243 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 SPATA24Q86W54 205 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 ALDH16A1Q8IZ83 802 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 CANT1Q8WVQ1 401 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 CADM1Q9BY67 442 aaKnown RBP20.28■□□□□ 0.84
SNF8-217ENST00000576353 POMPQ9Y244 141 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 U3KQV3 271 aa20.28■□□□□ 0.84
SNF8-217ENST00000576353 FLNAP21333 2647 aaKnown RBP20.27■□□□□ 0.84
SNF8-217ENST00000576353 CRABP1P29762 137 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 CDKN2AP42771 156 aaKnown RBP20.27■□□□□ 0.84
SNF8-217ENST00000576353 EFNA4P52798 201 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 DSCR9P59020 149 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 PSG4Q00888 419 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 PPP1R8Q12972 351 aaKnown RBP20.27■□□□□ 0.84
SNF8-217ENST00000576353 DNM1P34Q6PK57 102 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 PTCHD4Q6ZW05 846 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 BIVMQ86UB2 503 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 GLB1L2Q8IW92 636 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 AQP11Q8NBQ7 271 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 OR52L1Q8NGH7 329 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 COX4I2Q96KJ9 171 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 SNX18Q96RF0 628 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 ZNF416Q9BWM5 594 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 OR2H1Q9GZK4 316 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 NUAK2Q9H093 628 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 RERGLQ9H628 205 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 YY1AP1Q9H869 796 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 CDH10Q9Y6N8 788 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 ACANP16112 2415 aa20.27■□□□□ 0.84
SNF8-217ENST00000576353 GNGT2O14610 69 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 RENP00797 406 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 CCL2P13500 99 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 GSTM3P21266 225 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 STOMP27105 288 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 APEX1P27695 318 aaKnown RBP20.26■□□□□ 0.83
SNF8-217ENST00000576353 EVX1P49640 407 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 TNK1Q13470 666 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 ENDOGQ14249 297 aaKnown RBP20.26■□□□□ 0.83
SNF8-217ENST00000576353 RASSF6Q6ZTQ3 369 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 SVOPLQ8N434 492 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 CPEB3Q8NE35 698 aaKnown RBP20.26■□□□□ 0.83
SNF8-217ENST00000576353 MRPL24Q96A35 216 aaKnown RBP20.26■□□□□ 0.83
SNF8-217ENST00000576353 DOK1Q99704 481 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 VRK1Q99986 396 aaPredicted RBP20.26■□□□□ 0.83
SNF8-217ENST00000576353 VNN3Q9NY84 501 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 IL20Q9NYY1 176 aa20.26■□□□□ 0.83
SNF8-217ENST00000576353 FAM171A2A8MVW0 826 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 GPRIN2O60269 458 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 F12P00748 615 aaPredicted RBP20.25■□□□□ 0.83
SNF8-217ENST00000576353 PCSK6P29122 969 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 RAD52P43351 418 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 PPOXP50336 477 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 DNM1P46Q6ZS02 220 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 CIARTQ8N365 385 aaPredicted RBP20.25■□□□□ 0.83
SNF8-217ENST00000576353 PAQR4Q8N4S7 273 aaPredicted RBP20.25■□□□□ 0.83
SNF8-217ENST00000576353 OR4K13Q8NH42 304 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 AKR7LQ8NHP1 331 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 RHNO1Q9BSD3 238 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 DGCR6LQ9BY27 220 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 EGLN3Q9H6Z9 239 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 EMC7Q9NPA0 242 aa20.25■□□□□ 0.83
SNF8-217ENST00000576353 COA3Q9Y2R0 106 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms