RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 NR4A2P43354 598 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 POLEQ07864 2286 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 NKPD1Q17RQ9 610 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 CTU2Q2VPK5 515 aaKnown RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 SOWAHCQ53LP3 525 aaPredicted RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 RPL22L1Q6P5R6 122 aaKnown RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 KANSL1Q7Z3B3 1105 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 TRMT10AQ8TBZ6 339 aaKnown RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 KISS1RQ969F8 398 aaPredicted RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 OBP2BQ9NPH6 170 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 PAK1IP1Q9NWT1 392 aaPredicted RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 DIMT1Q9UNQ2 313 aaKnown RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 U3KQA8 63 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 RTTNQ86VV8 2226 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 CLUP10909 449 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 S100GP29377 79 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 THSD4Q6ZMP0 1018 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 WFDC8Q8IUA0 241 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 OR5D14Q8NGL3 314 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 S100A16Q96FQ6 103 aaKnown RBP9.08□□□□□ -0.96
SMG6-213ENST00000573166 NDRG3Q9UGV2 375 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 TRAPPC4Q9Y296 219 aa9.08□□□□□ -0.96
SMG6-213ENST00000573166 A0A1B0GTH9 108 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 FAM230AA0A1W2PPH8 454 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 DLGAP1O14490 977 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 GATBO75879 557 aaKnown RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 RLN1P04808 185 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 FCER2P06734 321 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 BMP4P12644 408 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 HCCSP53701 268 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 NKAPLQ5M9Q1 402 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 BMPERQ8N8U9 685 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 OR9K2Q8NGE7 335 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 OR13F1Q8NGS4 319 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 NARS2Q96I59 477 aaKnown RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 URM1Q9BTM9 101 aaKnown RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 PAPOLGQ9BWT3 736 aaKnown RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 BCL2L14Q9BZR8 327 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 ACTR6Q9GZN1 396 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 TMEFF2Q9UIK5 374 aaPredicted RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 ING1Q9UK53 422 aaPredicted RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 B9D1Q9UPM9 204 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 TIMM10BQ9Y5J6 103 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 LIPT2A6NK58 231 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 THBS2P35442 1172 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 AQP6Q13520 282 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 KIF26BQ2KJY2 2108 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 TBC1D28Q2M2D7 210 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 PLPPR5Q32ZL2 321 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 CD163Q86VB7 1156 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 BEX2Q9BXY8 128 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 TBCCD1Q9NVR7 557 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 GLS2Q9UI32 602 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 KCNE5Q9UJ90 142 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 ZNF878C9JN71 531 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 PLPP3O14495 311 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 ARPC3O15145 178 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 GPRIN2O60269 458 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 TNFSF4P23510 183 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 ARPC4P59998 168 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 RSU1Q15404 277 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 OR4Q3Q8NH05 313 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 OR52N5Q8NH56 324 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 PRR7Q8TB68 274 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 FOXB1Q99853 325 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 SLC25A18Q9H1K4 315 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 OR51E2Q9H255 320 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 TMEM138Q9NPI0 162 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 AK6Q9Y3D8 172 aaKnown RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 CRYAAP02489 173 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 FAM87AP0C7U9 286 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 CDAP32320 146 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 SNRPNP63162 240 aaKnown RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 LSM11P83369 360 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMG6-213ENST00000573166 FMODQ06828 376 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 MLLT11Q13015 90 aaPredicted RBP9.07□□□□□ -0.96
SMG6-213ENST00000573166 LIPNQ5VXI9 398 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 NOXO1Q8NFA2 376 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 GHSRQ92847 366 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 CLEC2DQ9UHP7 191 aa9.07□□□□□ -0.96
SMG6-213ENST00000573166 MYLKQ15746 1914 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 TIMM8AO60220 97 aaPredicted RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 GCM2O75603 506 aaPredicted RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 GSTT2P0CG29 244 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 GSTT2BP0CG30 244 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 RAB3AP20336 220 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 CFL1P23528 166 aaKnown RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 LIMK1P53667 647 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 AP3S2P59780 193 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 PITPNAQ00169 270 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 ATAD3CQ5T2N8 411 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 CA5BP1Q8WTZ4 195 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 SMAP2Q8WU79 429 aaPredicted RBP9.06□□□□□ -0.96
SMG6-213ENST00000573166 SLAMF6Q96DU3 332 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 TXNDC15Q96J42 360 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 NEDD4LQ96PU5 975 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 CITED4Q96RK1 184 aa9.06□□□□□ -0.96
SMG6-213ENST00000573166 LHX6Q9UPM6 363 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms