RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PWWP2BQ6NUJ5 590 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 DHRS4L2Q6PKH6 230 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 PARM1Q6UWI2 310 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 CCNI2Q6ZMN8 369 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF782Q6ZMW2 699 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 Q6ZT83 130 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 Q6ZVQ6 151 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 MBOAT2Q6ZWT7 520 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 IFNEQ86WN2 208 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 LACC1Q8IV20 430 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 RNF113BQ8IZP6 322 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 EID2Q8N6I1 236 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 TCEANCQ8N8B7 351 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 OLIG1Q8TAK6 271 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 DOK4Q8TEW6 326 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 OR5P2Q8WZ92 322 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 DACT3Q96B18 629 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 TESCQ96BS2 214 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 OR2V2Q96R30 315 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 TSNAXQ99598 290 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 DHRS9Q9BPW9 319 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 TMEM59Q9BXS4 323 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 FNDC4Q9H6D8 234 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 KRCC1Q9NPI7 259 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 IMPAD1Q9NX62 359 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 THUMPD1Q9NXG2 353 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 B3GNT2Q9NY97 397 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 MUTYHQ9UIF7 546 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF391Q9UJN7 358 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ASF1AQ9Y294 204 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 ERCC6Q03468 1493 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 SNAPC4Q5SXM2 1469 aa4.3□□□□□ -1.72
TOPBP1-210ENST00000572787 PLEKHH1Q9ULM0 1364 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 A0A087WZ39 114 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 TRBV5-3A0A0A0MS03 114 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 LOC101059948A0A1B0GTJ6 334 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 B8ZZF3 427 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ANHXE9PGG2 379 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 F5H5T6 163 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 PHF1O43189 567 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNHIT1O43257 154 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 B4GALT3O60512 393 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 HPP00738 406 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 OAS1P00973 400 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 CRYAAP02489 173 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 LGALS2P05162 132 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 CD5P06127 495 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 WNT2P09544 360 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 LIMS3P0CW19 117 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 LIMS4P0CW20 117 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 HIST1H1EP10412 219 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 FGF3P11487 239 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 IGFBP3P17936 291 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 CA6P23280 308 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ACRV1P26436 265 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 GDF1P27539 372 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 CFPP27918 469 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 HTR1FP30939 366 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 SSTR4P31391 388 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 MPIP34949 423 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 SAA4P35542 130 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ERFP50548 548 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 OR10A3P58181 314 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 TAS2R31P59538 309 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 RAB8AP61006 207 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ACVR1Q04771 509 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 TBC1D28Q2M2D7 210 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF284Q2VY69 593 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 TTLL9Q3SXZ7 439 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 TIGITQ495A1 244 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 CARD16Q5EG05 197 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 PXDC1Q5TGL8 231 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 STAC2Q6ZMT1 411 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 SLC16A12Q6ZSM3 486 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 BHLHA9Q7RTU4 235 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 CA13Q8N1Q1 262 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 PRELID2Q8N945 189 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 MDS2Q8NDY4 140 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 OR10X1Q8NGY0 326 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 OR2T11Q8NH01 316 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 OR5B3Q8NH48 314 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 IL17DQ8TAD2 202 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 PYROXD1Q8WU10 500 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 RAB8BQ92930 207 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 RAB3CQ96E17 227 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 MS4A14Q96JA4 679 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 Q96MF0 132 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 PSMB7Q99436 277 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 PHB2Q99623 299 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 TIPINQ9BVW5 301 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 NUDT9Q9BW91 350 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 NXF2Q9GZY0 626 aaKnown RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 UBE2ZQ9H832 354 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ZNF430Q9H8G1 570 aaPredicted RBP4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 MAP6D1Q9H9H5 199 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 Q9HAA7 133 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 ARMC1Q9NVT9 282 aa4.29□□□□□ -1.72
TOPBP1-210ENST00000572787 NDRG2Q9UN36 371 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms