RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 GPN1Q9HCN4 374 aaPredicted RBP14.63□□□□□ -0.07
RAB40B-206ENST00000571995 COMMD9Q9P000 198 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 CCSO14618 274 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 TCN2P20062 427 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 PRSS3P35030 304 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 SLC6A8P48029 635 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 STARP49675 285 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 RPS15P62841 145 aaKnown RBP14.63□□□□□ -0.07
RAB40B-206ENST00000571995 OR51A2Q8NGJ7 313 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 OR51S1Q8NGJ8 323 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 SLC41A2Q96JW4 573 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 CHMP1AQ9HD42 196 aaPredicted RBP14.63□□□□□ -0.07
RAB40B-206ENST00000571995 PLEK2Q9NYT0 353 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 PRR14LQ5THK1 2151 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 SCO1O75880 301 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 IL33O95760 270 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 DDOSTP39656 456 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 C19orf48Q6RUI8 117 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF704Q6ZNC4 412 aaPredicted RBP14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF615Q8N8J6 731 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 IFI44Q8TCB0 444 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ST6GALNAC5Q9BVH7 336 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 C19orf25Q9UFG5 118 aaPredicted RBP14.62□□□□□ -0.07
RAB40B-206ENST00000571995 COL4A3Q01955 1670 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 M0R233 179 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 HPXP02790 462 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ITGA3P26006 1051 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 EFNB2P52799 333 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 RPL27P61353 136 aaKnown RBP14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ABHD6Q9BV23 337 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.62□□□□□ -0.077e-9■■■■□ 20
RAB40B-206ENST00000571995 C20orf85Q9H1P6 137 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 RDH8Q9NYR8 311 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 SRPK3Q9UPE1 567 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 IGKV1D-42A0A075B6H8 117 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 HOXC4P09017 264 aaPredicted RBP14.62□□□□□ -0.07
RAB40B-206ENST00000571995 PATE4P0C8F1 98 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 PI3P19957 117 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 OR3A3P47888 321 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 OR3A2P47893 321 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 HSF2Q03933 536 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 TMEM205Q6UW68 189 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ALKAL2Q6UX46 152 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 OR4S1Q8NGB4 309 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 OR1N1Q8NGS0 311 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF524Q96C55 264 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 DDIT4LQ96D03 193 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 PGLYRP3Q96LB9 341 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 CDX2Q99626 313 aaPredicted RBP14.62□□□□□ -0.07
RAB40B-206ENST00000571995 BCL2L14Q9BZR8 327 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 SELENOIQ9C0D9 397 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 ABRACLQ9P1F3 81 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 SLC5A6Q9Y289 635 aa14.62□□□□□ -0.07
RAB40B-206ENST00000571995 OBSL1O75147 1896 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 NSG1A0A0A6YYJ2 146 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 PSMB1P20618 241 aaKnown RBP14.61□□□□□ -0.07
RAB40B-206ENST00000571995 P2RX1P51575 399 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 SKP2Q13309 424 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 CEBPEQ15744 281 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF141Q15928 474 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 PLXDC2Q6UX71 529 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 GALNT11Q8NCW6 608 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 POLE3Q9NRF9 147 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 OR5V1Q9UGF6 321 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 DOCK10Q96BY6 2186 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 TP53I11O14683 189 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 SPDEFO95238 335 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 THOC7Q6I9Y2 204 aaKnown RBP14.61□□□□□ -0.07
RAB40B-206ENST00000571995 ATG4DQ86TL0 474 aaPredicted RBP14.61□□□□□ -0.07
RAB40B-206ENST00000571995 FAM3DQ96BQ1 224 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 FBXL2Q9UKC9 423 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 SHANK1Q9Y566 2161 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 ABCA4P78363 2273 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 C2orf16Q68DN1 1984 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 PIN1P1O15428 100 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 CREBL2O60519 120 aaPredicted RBP14.61□□□□□ -0.07
RAB40B-206ENST00000571995 CRTAPO75718 401 aaPredicted RBP14.61□□□□□ -0.07
RAB40B-206ENST00000571995 DPP4P27487 766 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 TAS2R20P59543 309 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 C17orf67Q0P5P2 114 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 FUT7Q11130 342 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 SLC25A30Q5SVS4 291 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 SLC22A8Q8TCC7 542 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 YIPF5Q969M3 257 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 MNTQ99583 582 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 SLC23A1Q9UHI7 598 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 ST6GALNAC2Q9UJ37 374 aa14.61□□□□□ -0.07
RAB40B-206ENST00000571995 PRSS37A4D1T9 235 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 LILRA5A6NI73 299 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 LMX1BO60663 402 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 ST3GAL2Q16842 350 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 LINC00303Q3SY05 128 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 UBE2NLQ5JXB2 153 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 GRINAQ7Z429 371 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 OR51E1Q8TCB6 317 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 C1QTNF6Q9BXI9 259 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 ISYNA1Q9NPH2 558 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 ELF5Q9UKW6 265 aaPredicted RBP14.6□□□□□ -0.07
RAB40B-206ENST00000571995 HHLA2Q9UM44 414 aa14.6□□□□□ -0.07
RAB40B-206ENST00000571995 MMACHCQ9Y4U1 282 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms