RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CMTM5Q96DZ9 223 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 BCL2L14Q9BZR8 327 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 MAN2C1Q9NTJ4 1040 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 MYEF2Q9P2K5 600 aaKnown RBP10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 SNX13Q9Y5W8 968 aa10.61□□□□□ -0.71
CTDNEP1-205ENST00000570828 A6NIZ1 184 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RNF212BA8MTL3 300 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 FFAR1O14842 300 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 MMP7P09237 267 aaPredicted RBP10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 NAT2P11245 290 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF32P17041 273 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 SRD5A1P18405 259 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 MAKP20794 623 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 CCNOP22674 350 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RAD52P43351 418 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 SLC9A3P48764 834 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 SEC24CP53992 1094 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 CTXN1P60606 82 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RAP1BP61224 184 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RAP1AP62834 184 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 SGCAQ16586 387 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 ALKBH6Q3KRA9 238 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 ANKDD1AQ495B1 522 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 PABPC1L2AQ5JQF8 200 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 FAM120AOSQ5T036 256 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 THEM4Q5T1C6 240 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 C8orf82Q6P1X6 216 aaPredicted RBP10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 CBLL1Q75N03 491 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 MEX3DQ86XN8 651 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 TREML1Q86YW5 311 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RNF113BQ8IZP6 322 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 ARIH2OSQ8N7S6 290 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 OR13C2Q8NGS9 318 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 OR51A7Q8NH64 312 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF519Q8TB69 540 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 SYNPRQ8TBG9 265 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 C11orf40Q8WZ69 217 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RDH5Q92781 318 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 NABP1Q96AH0 204 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 NMD3Q96D46 503 aaKnown RBP10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RBP7Q96R05 134 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 NDEL1Q9GZM8 345 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 SLCO1C1Q9NYB5 712 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 TAAR3PQ9P1P4 343 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 RPS6KA6Q9UK32 745 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 UGT2A1Q9Y4X1 527 aa10.6□□□□□ -0.71
CTDNEP1-205ENST00000570828 IGKV1D-43A0A0B4J1Z2 117 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 A0A1W2PPL8 197 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 HPXP02790 462 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 MT-ND5P03915 603 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 ZNF250P15622 560 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 FUT4P22083 530 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 ACHEP22303 614 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 STOMP27105 288 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 RPL4P36578 427 aaKnown RBP10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 GPR6P46095 362 aaPredicted RBP10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 UCP2P55851 309 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 ERVS71-1P61550 626 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 PRKCDQ05655 676 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 CCNIQ14094 377 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 TRIP10Q15642 601 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 ELFN2Q5R3F8 820 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 TMEM154Q6P9G4 183 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 UGT2A3Q6UWM9 527 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 UNQ6126/PRO20091Q6UXV3 157 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 IL17RELQ6ZVW7 336 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 MBOAT2Q6ZWT7 520 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 RRM2BQ7LG56 351 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 CLDN22Q8N7P3 220 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 SPATA3Q8NHX4 192 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 TMEM158Q8WZ71 300 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 TSPAN32Q96QS1 320 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 ELAC2Q9BQ52 826 aaKnown RBP10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 FAM107BQ9H098 131 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 NSRP1Q9H0G5 558 aaKnown RBP10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 ANKRD19PQ9H560 264 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 SPAG4Q9NPE6 437 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 HINT3Q9NQE9 182 aaKnown RBP10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 ABCD2Q9UBJ2 740 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 TMEM5Q9Y2B1 443 aa10.59□□□□□ -0.71
CTDNEP1-205ENST00000570828 SVEP1Q4LDE5 3571 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 IGLV3-9A0A075B6K5 115 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 A0A087WUU8 490 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 PHF1O43189 567 aaPredicted RBP10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 GMNNO75496 209 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 NCR1O76036 304 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 PRSS23O95084 383 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 CLPTM1O96005 669 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 NCK1P16333 377 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 DRD4P21917 467 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 IL2RGP31785 369 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 GPR4P46093 362 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 GDI2P50395 445 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 PSME3P61289 254 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 PCBD1P61457 104 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 ERVK-25P63136 954 aa10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 MRPS11P82912 194 aaKnown RBP10.58□□□□□ -0.72
CTDNEP1-205ENST00000570828 GLO1Q04760 184 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms