RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 ZNF586Q9NXT0 402 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 SLC7A8Q9UHI5 535 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 MMP17Q9ULZ9 603 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CARHSP1Q9Y2V2 147 aaKnown RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 STARD10Q9Y365 291 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 CAB39Q9Y376 341 aaPredicted RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 TMED5Q9Y3A6 229 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 USP47Q96K76 1375 aa1.29□□□□□ -2.2
BBS4-215ENST00000569001 COL22A1Q8NFW1 1626 aaPredicted RBP1.29□□□□□ -2.2
BBS4-215ENST00000569001 A0A075B6Q4 140 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 BTBD17A6NE02 478 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 C9JVG2 144 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 H0YIV9 168 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 DNALI1O14645 258 aaPredicted RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 MRPS12O15235 138 aaKnown RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 SLC31A2O15432 143 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 RRP8O43159 456 aaKnown RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 SOX15O60248 233 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 OR2F2O95006 317 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 VAMP5O95183 116 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 OXSR1O95747 527 aaPredicted RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 BGLAPP02818 100 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 PABPC4LP0CB38 370 aaKnown RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 GKN3PP0CG01 181 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 IGHV3-43DP0DP04 118 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 PSMC3P17980 439 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 FOXN2P32314 431 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 RAB9AP51151 201 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 PRRX1P54821 245 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 UGT2B15P54855 530 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 MAB21L1Q13394 359 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 ZBED5Q49AG3 693 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 VPS26BQ4G0F5 336 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 RNASEKQ6P5S7 137 aaKnown RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 Q6ZSR3 168 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 BZW1Q7L1Q6 419 aaKnown RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 PLA2G4DQ86XP0 818 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 LGI3Q8N145 548 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 PLPPR1Q8TBJ4 325 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 FAM110BQ8TC76 370 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 ACMSDQ8TDX5 336 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.28□□□□□ -2.2
BBS4-215ENST00000569001 MCUR1Q96AQ8 359 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 AURKBQ96GD4 344 aaPredicted RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 NAP1L5Q96NT1 182 aaPredicted RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 PANX2Q96RD6 677 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 SORT1Q99523 831 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 MTG1Q9BT17 334 aaPredicted RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 CHAC1Q9BUX1 264 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 GBA3Q9H227 469 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 AUNIPQ9H7T9 357 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 C12orf10Q9HB07 376 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 EXD2Q9NVH0 621 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 PSMC3IPQ9P2W1 217 aaPredicted RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 XCL2Q9UBD3 114 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 NUP50Q9UKX7 468 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 KCNIP3Q9Y2W7 256 aa1.28□□□□□ -2.2
BBS4-215ENST00000569001 COL27A1Q8IZC6 1860 aaPredicted RBP1.28□□□□□ -2.2
BBS4-215ENST00000569001 CARMIL3Q8ND23 1372 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.27□□□□□ -2.21
BBS4-215ENST00000569001 TRAV39A0A0B4J263 110 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 IGHV3-66A0A0C4DH42 116 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 A8MUU9 505 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 CCL21O00585 134 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 DYNC1I1O14576 645 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 PSTPIP1O43586 416 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 CHST1O43916 411 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 MGRN1O60291 552 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 CCNKO75909 580 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 SERPIND1P05546 499 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 UBTFL1P0CB47 393 aaPredicted RBP1.27□□□□□ -2.21
BBS4-215ENST00000569001 TCN1P20061 433 aaPredicted RBP1.27□□□□□ -2.21
BBS4-215ENST00000569001 NSG1P42857 185 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 SSR4P51571 173 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 CDH6P55285 790 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 GPX6P59796 221 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 SLC7A9P82251 487 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 MRPS22P82650 360 aaKnown RBP1.27□□□□□ -2.21
BBS4-215ENST00000569001 SPAG1Q07617 926 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 RCN1Q15293 331 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 PGGHGQ32M88 737 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 TTLL9Q3SXZ7 439 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 HSP90AB3PQ58FF7 597 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 TRIM40Q6P9F5 258 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 SASS6Q6UVJ0 657 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 UQCC3Q6UW78 93 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 H2AFVQ71UI9 128 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 ZNF557Q8N988 423 aaPredicted RBP1.27□□□□□ -2.21
BBS4-215ENST00000569001 SDR9C7Q8NEX9 313 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 B3GNT7Q8NFL0 401 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 OR1N2Q8NGR9 330 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 RGP1Q92546 391 aaPredicted RBP1.27□□□□□ -2.21
BBS4-215ENST00000569001 WFIKKN1Q96NZ8 548 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 MS4A4EQ96PG1 132 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 OR8B4Q96RC9 309 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 SH3GL3Q99963 347 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 TMEM185BQ9H7F4 350 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 TMEM165Q9HC07 324 aa1.27□□□□□ -2.21
BBS4-215ENST00000569001 MRPL47Q9HD33 250 aaKnown RBP1.27□□□□□ -2.21
BBS4-215ENST00000569001 GPATCH2LQ9NWQ4 482 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms