RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 FOXH1O75593 365 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 TGDSO95455 350 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 IGHMP01871 453 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 TNFRSF1BP20333 461 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 GCH1P30793 250 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 CD80P33681 288 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 AQP2P41181 271 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 TNFAIP6P98066 277 aaPredicted RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 HOXA4Q00056 320 aaPredicted RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 PSG4Q00888 419 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 PLP2Q04941 152 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 RPL18Q07020 188 aaKnown RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 SGCAQ16586 387 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 BRD3OSQ6XYD6 125 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 Q6ZR03 302 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 ASB10Q8WXI3 467 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 HDAC2Q92769 488 aaKnown RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 TMIGD2Q96BF3 282 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 PKP2Q99959 881 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 WNT5BQ9H1J7 359 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 VIPAS39Q9H9C1 493 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 MEPEQ9NQ76 525 aaPredicted RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 NANSQ9NR45 359 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 TMEM106BQ9NUM4 274 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 THUMPD1Q9NXG2 353 aaKnown RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 SLC13A4Q9UKG4 626 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 TRBV5-3A0A0A0MS03 114 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 TRAV40A0A0B4J280 105 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 PLSCR5A0PG75 271 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
USB1-214ENST00000568848 MT-ATP6P00846 226 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 IGHG1P01857 330 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 ASAH2BP0C7U1 165 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 GATA3P23771 443 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 SLC6A9P48067 706 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 STX1BP61266 288 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 PPP1CBP62140 327 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 RELBQ01201 579 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 FAM209AQ5JX71 171 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 ZNF774Q6NX45 483 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 MSANTD1Q6ZTZ1 278 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 KRT73Q86Y46 540 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 PTOV1Q86YD1 416 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 PARP8Q8N3A8 854 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 HIPK4Q8NE63 616 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 OR1J2Q8NGS2 313 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 POP5Q969H6 163 aaKnown RBP12.48□□□□□ -0.41
USB1-214ENST00000568848 SIGLEC11Q96RL6 698 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 PRSS27Q9BQR3 290 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 CCDC28BQ9BUN5 200 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 MARCH7Q9H992 704 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 PATZ1Q9HBE1 687 aaKnown RBP12.48□□□□□ -0.41
USB1-214ENST00000568848 CCDC167Q9P0B6 97 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.48□□□□□ -0.41
USB1-214ENST00000568848 PRDM4Q9UKN5 801 aa12.48□□□□□ -0.41
USB1-214ENST00000568848 MCIDASD6RGH6 385 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 CHP2O43745 196 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 MT-ND5P03915 603 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 SCG5P05408 212 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 FUT4P22083 530 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 ZNF84P51523 738 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 UGT2B15P54855 530 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 IL13RA1P78552 427 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 PSG7Q13046 419 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 TOP3AQ13472 1001 aaPredicted RBP12.47□□□□□ -0.41
USB1-214ENST00000568848 DEFB112Q30KQ8 113 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 FAM201AQ5SY85 155 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 LRIF1Q5T3J3 769 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 BLOC1S3Q6QNY0 202 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 TREML1Q86YW5 311 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 OR2Z1Q8NG97 314 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 ZNF420Q8TAQ5 688 aaPredicted RBP12.47□□□□□ -0.41
USB1-214ENST00000568848 ADAMTS16Q8TE57 1224 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 WFDC12Q8WWY7 111 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 SLC25A28Q96A46 364 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 CPPED1Q9BRF8 314 aaPredicted RBP12.47□□□□□ -0.41
USB1-214ENST00000568848 SPATA5L1Q9BVQ7 753 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 MRPL13Q9BYD1 178 aaKnown RBP12.47□□□□□ -0.41
USB1-214ENST00000568848 LRMDAQ9H2I8 198 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 CCNB1IP1Q9NPC3 277 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 C20orf141Q9NUB4 165 aa12.47□□□□□ -0.41
USB1-214ENST00000568848 F5H0A9 414 aaPredicted RBP12.46□□□□□ -0.41
USB1-214ENST00000568848 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
USB1-214ENST00000568848 PIP5K1CO60331 668 aa12.46□□□□□ -0.41
USB1-214ENST00000568848 ACADSP16219 412 aa12.46□□□□□ -0.41
USB1-214ENST00000568848 SELEP16581 610 aa12.46□□□□□ -0.41
USB1-214ENST00000568848 SLC6A2P23975 617 aa12.46□□□□□ -0.41
USB1-214ENST00000568848 LAP3P28838 519 aa12.46□□□□□ -0.41
USB1-214ENST00000568848 MRPL19P49406 292 aaKnown RBP12.46□□□□□ -0.41
USB1-214ENST00000568848 GDI2P50395 445 aaKnown RBP12.46□□□□□ -0.41
USB1-214ENST00000568848 PRSS12P56730 875 aa12.46□□□□□ -0.41
USB1-214ENST00000568848 MTPNP58546 118 aa12.46□□□□□ -0.41
USB1-214ENST00000568848 MMEL1Q495T6 779 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms