RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SLC25A44Q96H78 314 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-221ENST00000567935 WDFY2Q96P53 400 aa13.03□□□□□ -0.32
COMMD4-221ENST00000567935 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
COMMD4-221ENST00000567935 RNF32Q9H0A6 362 aa13.03□□□□□ -0.32
COMMD4-221ENST00000567935 TMEM185BQ9H7F4 350 aa13.03□□□□□ -0.32
COMMD4-221ENST00000567935 KCNG2Q9UJ96 466 aa13.03□□□□□ -0.32
COMMD4-221ENST00000567935 CELSR1Q9NYQ6 3014 aa13.03□□□□□ -0.32
COMMD4-221ENST00000567935 NF1P21359 2839 aa13.03□□□□□ -0.32
COMMD4-221ENST00000567935 TRBV2A0A0J9YWF9 115 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 A0A1W2PNR3 127 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 TVP23AA6NH52 213 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 MASP2O00187 686 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 TRAF3IP2O43734 574 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-221ENST00000567935 TMCC2O75069 709 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 TMEM127O75204 238 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF823P16415 610 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF12P17014 697 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 AGFG1P52594 562 aaKnown RBP13.02□□□□□ -0.33
COMMD4-221ENST00000567935 HCCSP53701 268 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 BIDP55957 195 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 B3GALT5-AS1P59052 145 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 ROM1Q03395 351 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 HNRNPA0Q13151 305 aaKnown RBP13.02□□□□□ -0.33
COMMD4-221ENST00000567935 YIF1BQ5BJH7 314 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 SPANXN2Q5MJ10 180 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 FDX2Q6P4F2 183 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 ESPNLQ6ZVH7 1005 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 DPY19L4Q7Z388 723 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 RFLNBQ8N5W9 214 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 NOXO1Q8NFA2 376 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 OR5M1Q8NGP8 315 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 OR14L1PQ8NHC6 308 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 ACOT12Q8WYK0 555 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
COMMD4-221ENST00000567935 CEP19Q96LK0 163 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 OR8B4Q96RC9 309 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 SF3B5Q9BWJ5 86 aaKnown RBP13.02□□□□□ -0.33
COMMD4-221ENST00000567935 MRPL13Q9BYD1 178 aaKnown RBP13.02□□□□□ -0.33
COMMD4-221ENST00000567935 RERGLQ9H628 205 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 ACOXLQ9NUZ1 547 aa13.02□□□□□ -0.33
COMMD4-221ENST00000567935 KLF13Q9Y2Y9 288 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-221ENST00000567935 TRAV1-2A0A0B4J238 106 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 SLC35F4A4IF30 521 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 CD8B2A6NJW9 211 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF726A6NNF4 738 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 LOC110117498-PIK3R3F6TDL0 507 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 G3V3Y1 287 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF593O00488 134 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-221ENST00000567935 NKX2-8O15522 239 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF254O75437 659 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 NEURL1O76050 574 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 AQP8O94778 261 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ABHD16AO95870 558 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 PRKAR1AP10644 381 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 CD8BP10966 210 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 PRF1P14222 555 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 TCEA1P23193 301 aaKnown RBP13.01□□□□□ -0.33
COMMD4-221ENST00000567935 SHC1P29353 583 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 CLRN1P58418 232 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 RAC3P60763 192 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 RASGEF1BQ0VAM2 473 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 PCK2Q16822 640 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ACSM3Q53FZ2 586 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 MZT2AQ6P582 158 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 DEGS2Q6QHC5 323 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 LYPD4Q6UWN0 246 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 GLB1L2Q8IW92 636 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 KDM8Q8N371 416 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 YIPF7Q8N8F6 280 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 SLC26A10Q8NG04 563 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 OR2M7Q8NG81 312 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 SMAP2Q8WU79 429 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-221ENST00000567935 PNPLA2Q96AD5 504 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 INTS12Q96CB8 462 aaKnown RBP13.01□□□□□ -0.33
COMMD4-221ENST00000567935 SH3GL3Q99963 347 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ANKRD10Q9NXR5 420 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 MRM2Q9UI43 246 aaKnown RBP13.01□□□□□ -0.33
COMMD4-221ENST00000567935 IKZF2Q9UKS7 526 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF281Q9Y2X9 895 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ALPK2Q86TB3 2170 aa13.01□□□□□ -0.33
COMMD4-221ENST00000567935 ANKRD61A6NGH8 418 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 TMEM212A6NML5 194 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF891A8MT65 544 aaPredicted RBP13□□□□□ -0.33
COMMD4-221ENST00000567935 ZNF879B4DU55 563 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 UPK3AO75631 287 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 SPARCP09486 303 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 PGA4P0DJD7 388 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 PGA3P0DJD8 388 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 MAPK3P27361 379 aaPredicted RBP13□□□□□ -0.33
COMMD4-221ENST00000567935 GDF1P27539 372 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 ADAM8P78325 824 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 DBPQ10586 325 aaPredicted RBP13□□□□□ -0.33
COMMD4-221ENST00000567935 FOXO1Q12778 655 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 ALKBH1Q13686 389 aaKnown RBP13□□□□□ -0.33
COMMD4-221ENST00000567935 TOMM20Q15388 145 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 OR1C1Q15619 314 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 DDI2Q5TDH0 399 aa13□□□□□ -0.33
COMMD4-221ENST00000567935 AGAP7PQ5VUJ5 663 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms