RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 KEAP1Q14145 624 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 ETFDHQ16134 617 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 ZSCAN26Q16670 478 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 PGGHGQ32M88 737 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 ZNF362Q5T0B9 420 aaPredicted RBP18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 AMIGO2Q86SJ2 522 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 SYT9Q86SS6 491 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 ZBTB46Q86UZ6 589 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 LRRC18Q8N456 261 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 SDR9C7Q8NEX9 313 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 OR52E2Q8NGJ4 325 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 OR4Q3Q8NH05 313 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 FGFBP3Q8TAT2 258 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 IGFBPL1Q8WX77 278 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 DDOQ99489 341 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 SEC61A2Q9H9S3 476 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 USF3Q68DE3 2245 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 PRRC2AP48634 2157 aaKnown RBP18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 IGLV1-36A0A0B4J1U3 117 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 OR6C68A6NDL8 312 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 ATP6V1G2-DDX39BF2Z307 99 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 ZNF23P17027 643 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 CD53P19397 219 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 PCBD1P61457 104 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 SGCAQ16586 387 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 SLC35F1Q5T1Q4 408 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 SLC27A4Q6P1M0 643 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 ZNF584Q8IVC4 421 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 OR6V1Q8N148 313 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 OSBPL10Q9BXB5 764 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 PAPOLBQ9NRJ5 636 aaKnown RBP18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 FAIMQ9NVQ4 179 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 CISD1Q9NZ45 108 aaKnown RBP18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 KLHL21Q9UJP4 597 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 POU2F3Q9UKI9 436 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 MOKQ9UQ07 419 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 PLEKHA6Q9Y2H5 1048 aa18.28■□□□□ 0.52
SHCBP1-205ENST00000566016 IGHV2OR16-5A0A0B4J2B6 119 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 C12orf71A8MTZ7 269 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 DCTN6O00399 190 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 PTHP01270 115 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 PATE4P0C8F1 98 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 GRK5P34947 590 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 LSM6P62312 80 aaKnown RBP18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 GLO1Q04760 184 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 ENDOGQ14249 297 aaKnown RBP18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 KCNMB1Q16558 191 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 OR4F15Q8NGB8 312 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 NEUROG1Q92886 237 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 PIGTQ969N2 578 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 FBXO17Q96EF6 278 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 CCNB1IP1Q9NPC3 277 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 RPRD1BQ9NQG5 326 aaKnown RBP18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 CMC2Q9NRP2 79 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 B9D1Q9UPM9 204 aa18.27■□□□□ 0.52
SHCBP1-205ENST00000566016 IFNGP01579 166 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 DANCRP0C864 163 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 GAAP10253 952 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 DAPP51397 102 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 KDM4DQ6B0I6 523 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 ZNF544Q6NX49 715 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 B3GLCTQ6Y288 498 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 NUP37Q8NFH4 326 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 MS4A3Q96HJ5 214 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 TSSK2Q96PF2 358 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 CCL19Q99731 98 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 DHRS9Q9BPW9 319 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 RBM4Q9BWF3 364 aaKnown RBP18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 ZNF416Q9BWM5 594 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 GRIP2Q9C0E4 1043 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 RNF121Q9H920 327 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 COA3Q9Y2R0 106 aaPredicted RBP18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 ARFGEF3Q5TH69 2177 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 RIIAD1A6NNX1 92 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 E7EQL1 145 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 ZNF35P13682 527 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 ZNF3P17036 446 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 ZNF32P17041 273 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 CALCRP30988 508 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 CDK5Q00535 292 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 PLP2Q04941 152 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 RAB39AQ14964 217 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 DTX2Q86UW9 622 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 SLC37A3Q8NCC5 494 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 OR2T4Q8NH00 348 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 SMAP2Q8WU79 429 aaPredicted RBP18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 NMNAT2Q9BZQ4 307 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 RERGLQ9H628 205 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 SLC25A19Q9HC21 320 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 BEX4Q9NWD9 120 aaPredicted RBP18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 ENOPH1Q9UHY7 261 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 OAZ3Q9UMX2 235 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 TIMM10BQ9Y5J6 103 aa18.26■□□□□ 0.51
SHCBP1-205ENST00000566016 SNAP29O95721 258 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 SLC25A1P53007 311 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 ESRRGP62508 458 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 HSF2Q03933 536 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 AQP6Q13520 282 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 CRMP1Q14194 572 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 PABPC1L2AQ5JQF8 200 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms