RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 SSR1P43307 286 aaKnown RBP2.12□□□□□ -2.07
PALB2-203ENST00000565038 TCP10Q12799 353 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 SNRNP35Q16560 246 aaKnown RBP2.12□□□□□ -2.07
PALB2-203ENST00000565038 IMMTQ16891 758 aaKnown RBP2.12□□□□□ -2.07
PALB2-203ENST00000565038 GALNT17Q6IS24 598 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 TEX43Q6ZNM6 134 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 SLC25A48Q6ZT89 311 aaKnown RBP2.12□□□□□ -2.07
PALB2-203ENST00000565038 ASCL5Q7RTU5 278 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 H2BFWTQ7Z2G1 175 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 EFL1Q7Z2Z2 1120 aaKnown RBP2.12□□□□□ -2.07
PALB2-203ENST00000565038 NOXO1Q8NFA2 376 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 LKAAEAR1Q8TD35 194 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 STMN2Q93045 179 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 UVRAGQ9P2Y5 699 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 ABCC10Q5T3U5 1492 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 PCM1Q15154 2024 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 KIAA0586Q9BVV6 1533 aa2.12□□□□□ -2.07
PALB2-203ENST00000565038 KIF27Q86VH2 1401 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 UACAQ9BZF9 1416 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 IGLV1-50A0A075B6I6 118 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 IGLV3-12A0A075B6K2 115 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 SOX15O60248 233 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 SPAG6O75602 509 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 FGGP02679 453 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 PTMAP06454 111 aaKnown RBP2.11□□□□□ -2.07
PALB2-203ENST00000565038 RNASE2P10153 161 aaKnown RBP2.11□□□□□ -2.07
PALB2-203ENST00000565038 GK3PQ14409 553 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 CLINT1Q14677 625 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 PTPN20Q4JDL3 420 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 ARL9Q6T311 187 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 MMAAQ8IVH4 418 aaKnown RBP2.11□□□□□ -2.07
PALB2-203ENST00000565038 PIK3IP1Q96FE7 263 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 ZNF681Q96N22 645 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 RNF5Q99942 180 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 UBE2ZQ9H832 354 aaPredicted RBP2.11□□□□□ -2.07
PALB2-203ENST00000565038 FN3KRPQ9HA64 309 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 SGK2Q9HBY8 427 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 SLC7A8Q9UHI5 535 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 ZNF639Q9UID6 485 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 NPTNQ9Y639 398 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 TET2Q6N021 2002 aaPredicted RBP2.11□□□□□ -2.07
PALB2-203ENST00000565038 DISP1Q96F81 1524 aa2.11□□□□□ -2.07
PALB2-203ENST00000565038 CD109Q6YHK3 1445 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 ATP10BO94823 1461 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 PLB1Q6P1J6 1458 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 TMEM50AO95807 157 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 UBTFL6P0CB48 400 aaPredicted RBP2.1□□□□□ -2.07
PALB2-203ENST00000565038 SLC11A1P49279 550 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 CEBPDP49716 269 aaPredicted RBP2.1□□□□□ -2.07
PALB2-203ENST00000565038 ZNF138P52744 262 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 ACTG2P63267 376 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 PITPNAQ00169 270 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 CDC20Q12834 499 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 ECH1Q13011 328 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 SMUG1Q53HV7 270 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 ANKRD22Q5VYY1 191 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 SAXO2Q658L1 398 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 PLET1Q6UQ28 207 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 TEX9Q8N6V9 391 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 NECAP1Q8NC96 275 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 OR10R2Q8NGX6 335 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 RSPH1Q8WYR4 309 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 NARS2Q96I59 477 aaKnown RBP2.1□□□□□ -2.07
PALB2-203ENST00000565038 ROPN1BQ9BZX4 212 aaPredicted RBP2.1□□□□□ -2.07
PALB2-203ENST00000565038 NT5MQ9NPB1 228 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 KCNJ16Q9NPI9 418 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 CTSFQ9UBX1 484 aa2.1□□□□□ -2.07
PALB2-203ENST00000565038 TOP2BQ02880 1626 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 ABCA5Q8WWZ7 1642 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 A0A1W2PPE3 182 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 ZNF233A6NK53 670 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 DYNC1I1O14576 645 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 GCM2O75603 506 aaPredicted RBP2.09□□□□□ -2.07
PALB2-203ENST00000565038 CT62P0C5K7 136 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 GPX6P59796 221 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 ZNF816Q0VGE8 651 aaPredicted RBP2.09□□□□□ -2.07
PALB2-203ENST00000565038 IL24Q13007 206 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 GPM6BQ13491 265 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 PON2Q15165 354 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 C6orf226Q5I0X4 101 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 CCNJQ5T5M9 372 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 TGIF2LXQ8IUE1 241 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 PRSS58Q8IYP2 241 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 BHLHE23Q8NDY6 225 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 OR8J1Q8NGP2 316 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 OR8U1Q8NH10 309 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 COQ8AQ8NI60 647 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 C15orf40Q8WUR7 153 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 RNF157Q96PX1 679 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 NPY6RQ99463 290 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 DOK1Q99704 481 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 SLC39A3Q9BRY0 314 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 PARP12Q9H0J9 701 aaKnown RBP2.09□□□□□ -2.07
PALB2-203ENST00000565038 SAV1Q9H4B6 383 aaPredicted RBP2.09□□□□□ -2.07
PALB2-203ENST00000565038 CWH43Q9H720 699 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 DOCK9Q9BZ29 2069 aa2.09□□□□□ -2.07
PALB2-203ENST00000565038 HIVEP2P31629 2446 aa2.09□□□□□ -2.08
PALB2-203ENST00000565038 CNTNAP1P78357 1384 aa2.09□□□□□ -2.08
PALB2-203ENST00000565038 ADAMTS13Q76LX8 1427 aa2.08□□□□□ -2.08
PALB2-203ENST00000565038 RAPGEF2Q9Y4G8 1499 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms