RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KCNRGQ8N5I3 272 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MRPL43Q8N983 215 aaKnown RBP18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MFRPQ9BY79 579 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GAREM1Q9H706 876 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 GRHPRQ9UBQ7 328 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MKL2Q9ULH7 1088 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SPAG17Q6Q759 2223 aa18.54■□□□□ 0.56
MAP1LC3B-206ENST00000564844 A0A0D9SG52 128 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 APBB3O95704 486 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF806P0C7X5 589 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CSF2RBP32927 897 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 FAM78AQ5JUQ0 283 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SVBPQ8N300 66 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 INO80EQ8NBZ0 244 aaPredicted RBP18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 BHLHE23Q8NDY6 225 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR1J4Q8NGS1 313 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CCDC107Q8WV48 283 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SLC25A36Q96CQ1 311 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 FAM117AQ9C073 453 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CTSFQ9UBX1 484 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 VSIG4Q9Y279 399 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 BCL2L11O43521 198 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PMS2P2O95744 297 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CASRP41180 1078 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ADAM8P78325 824 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TGIF1Q15583 401 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 C1QL3Q5VWW1 255 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RAB11FIP2Q7L804 512 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SLC16A9Q7RTY1 509 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF417Q8TAU3 575 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ELP5Q8TE02 316 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PARP12Q9H0J9 701 aaKnown RBP18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TRAV20A0A0B4J274 112 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 LINC00587B1AMM8 73 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 CDC40O60508 579 aaKnown RBP eCLIP18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 LMX1BO60663 402 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ITGB2P05107 769 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RD3LP0DJH9 198 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SNRPEP62304 92 aaKnown RBP18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PDZK1IP1Q13113 114 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 OR5M8Q8NGP6 311 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 NUBPLQ8TB37 319 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PHYHIPQ92561 330 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RERGQ96A58 199 aaPredicted RBP18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 POTEKPQ9BYX7 375 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 NMNAT2Q9BZQ4 307 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TAS2R4Q9NYW5 299 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 DHCR7Q9UBM7 475 aaKnown RBP18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 COLEC10Q9Y6Z7 277 aa18.53■□□□□ 0.56
MAP1LC3B-206ENST00000564844 SPARCP09486 303 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 PI3P19957 117 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 IGFALSP35858 605 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 LSSP48449 732 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 HOXA1P49639 335 aaPredicted RBP18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 IL13RA1P78552 427 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 TMEM151BQ8IW70 566 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ADAD2Q8NCV1 583 aaKnown RBP18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 RXFP4Q8TDU9 374 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 IGFLR1Q9H665 355 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 ZNF629Q9UEG4 869 aaPredicted RBP18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 MRPS18BQ9Y676 258 aaKnown RBP18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 BRWD1Q9NSI6 2320 aa18.52■□□□□ 0.56
MAP1LC3B-206ENST00000564844 AGTR1P30556 359 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 MEOX2P50222 304 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ASPHD2Q6ICH7 369 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SAMD14Q8IZD0 417 aaPredicted RBP18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR13C8Q8NGS7 320 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 NUDCD2Q8WVJ2 157 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 NDRG3Q9UGV2 375 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PILRAQ9UKJ1 303 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 B9D1Q9UPM9 204 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SLC27A6Q9Y2P4 619 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RP1P56715 2156 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 URB1O60287 2271 aaKnown RBP18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 VPS13AQ96RL7 3174 aa18.52■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TDRD6O60522 2096 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 A0A087WUJ7 227 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ABHD16AO95870 558 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 ZNHIT3Q15649 155 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 GAB4Q2WGN9 574 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 KLHL26Q53HC5 615 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CORO6Q6QEF8 472 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 LILRB2Q8N423 598 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PHOSPHO1Q8TCT1 267 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 DCUN1D4Q92564 292 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 KTI12Q96EK9 354 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 RBM18Q96H35 190 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 COA4Q9NYJ1 87 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SRPX2O60687 465 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TSFMP43897 325 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TAS2R19P59542 299 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 BTG2P78543 158 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CCDC157Q569K6 752 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 SPAG16Q8N0X2 631 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 KDM8Q8N371 416 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 OR5T2Q8NGG2 359 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PIGMQ9H3S5 423 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 TRBV5-5A0A0J9YX44 114 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 PRSS44E7EML9 344 aa18.51■□□□□ 0.55
MAP1LC3B-206ENST00000564844 CYR61O00622 381 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms