RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 A0A0D9SFI3 127 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 A0A1B0GUA9 196 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 MGRN1O60291 552 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 UPK3AO75631 287 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 YEATS4O95619 227 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 MOSP00540 346 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 CST1P01037 141 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 ALDOBP05062 364 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 SERPIND1P05546 499 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 NR2C1P13056 603 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 TNNI1P19237 187 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 GDI1P31150 447 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 SUCLG1P53597 346 aaKnown RBP3.15□□□□□ -1.91
LINC00560-201ENST00000564593 SYCP1Q15431 976 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 LRRC10Q5BKY1 277 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 RNASEKQ6P5S7 137 aaKnown RBP3.15□□□□□ -1.91
LINC00560-201ENST00000564593 CNIH2Q6PI25 160 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 THOC6Q86W42 341 aaKnown RBP3.15□□□□□ -1.91
LINC00560-201ENST00000564593 CCDC112Q8NEF3 446 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 PLIN2Q99541 437 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 BOLA2Q9H3K6 86 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 EXD2Q9NVH0 621 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 NMRK1Q9NWW6 199 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 NUFIP1Q9UHK0 495 aaKnown RBP3.15□□□□□ -1.91
LINC00560-201ENST00000564593 NEU3Q9UQ49 428 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 CACNG2Q9Y698 323 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 C4AP0C0L4 1744 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 C4BP0C0L5 1744 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 NWD2Q9ULI1 1742 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 TOGARAM1Q9Y4F4 1720 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 MAP3K15Q6ZN16 1313 aa3.15□□□□□ -1.91
LINC00560-201ENST00000564593 SCN2AQ99250 2005 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 LTBP1Q14766 1721 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 DOT1LQ8TEK3 1739 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 ERICH2A1L162 156 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 PINLYPA6NC86 204 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 GOLGA8OA6NCC3 632 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 GOLGA8NF8WBI6 632 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 CCL21O00585 134 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 RNF113AO15541 343 aaKnown RBP3.14□□□□□ -1.91
LINC00560-201ENST00000564593 IGKV5-2P06315 115 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 C2P06681 752 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 HNRNPH3P31942 346 aaKnown RBP3.14□□□□□ -1.91
LINC00560-201ENST00000564593 RORAP35398 523 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 NPBWR2P48146 333 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 FBXW4P57775 412 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 ENPEPQ07075 957 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 TGFBIQ15582 683 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 TMEM107Q6UX40 140 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 SLC25A48Q6ZT89 311 aaKnown RBP3.14□□□□□ -1.91
LINC00560-201ENST00000564593 VN1R2Q8NFZ6 395 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 OR56B2PQ8NGI1 322 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 OR1N2Q8NGR9 330 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 ACER1Q8TDN7 264 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 RASD2Q96D21 266 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 C8orf76Q96K31 380 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 OR2M2Q96R28 347 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 BPIFA3Q9BQP9 254 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 CLMPQ9H6B4 373 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 PSMC3IPQ9P2W1 217 aaPredicted RBP3.14□□□□□ -1.91
LINC00560-201ENST00000564593 RABL2AQ9UBK7 228 aaPredicted RBP3.14□□□□□ -1.91
LINC00560-201ENST00000564593 BCORQ6W2J9 1755 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 MROH5Q6ZUA9 1318 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 RTL9Q8NET4 1388 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 MYH1P12882 1939 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 RREB1Q92766 1687 aa3.14□□□□□ -1.91
LINC00560-201ENST00000564593 A0A1B0GUL6 1792 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 CASZ1Q86V15 1759 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 DLEC1Q9Y238 1755 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 HEATR9A2RTY3 570 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF716A6NP11 495 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 GOSR2O14653 212 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 PCCAP05165 728 aaPredicted RBP3.13□□□□□ -1.91
LINC00560-201ENST00000564593 TPM1P09493 284 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF735P0CB33 412 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 CRISP2P16562 243 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 RCC1P18754 421 aaPredicted RBP3.13□□□□□ -1.91
LINC00560-201ENST00000564593 CCNCP24863 283 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 SLC26A3P40879 764 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 CSNK1DP48730 415 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF133P52736 654 aaPredicted RBP3.13□□□□□ -1.91
LINC00560-201ENST00000564593 ARHGAP19Q14CB8 494 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 STK38Q15208 465 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 PPP1R7Q15435 360 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 MPPED2Q15777 294 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 FRMPD2BQ6IN97 320 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 LCN12Q6JVE5 192 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 COX15Q7KZN9 410 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 KRTAP11-1Q8IUC1 163 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 PUSL1Q8N0Z8 303 aaKnown RBP3.13□□□□□ -1.91
LINC00560-201ENST00000564593 SLC34A3Q8N130 599 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 ZADH2Q8N4Q0 377 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 ZNF557Q8N988 423 aaPredicted RBP3.13□□□□□ -1.91
LINC00560-201ENST00000564593 CCDC54Q8NEL0 328 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 OR4F15Q8NGB8 312 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 OR10G9Q8NGN4 311 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 OR6X1Q8NH79 312 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 MED8Q96G25 268 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 SH3GL1Q99961 368 aa3.13□□□□□ -1.91
LINC00560-201ENST00000564593 RARRES2Q99969 163 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms