RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 GINS1Q14691 196 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 ZNF544Q6NX49 715 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 PAMR1Q6UXH9 720 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 OR6V1Q8N148 313 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 SLC37A3Q8NCC5 494 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 SDR9C7Q8NEX9 313 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 NUP37Q8NFH4 326 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 OR4Q3Q8NH05 313 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 FBXW5Q969U6 566 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 HS3ST6Q96QI5 342 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 GABARAPL3Q9BY60 117 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 NMNAT2Q9BZQ4 307 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 FN3KQ9H479 309 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 CCNB1IP1Q9NPC3 277 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 MOKQ9UQ07 419 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 TACC2O95359 2948 aa14.52□□□□□ -0.09
RNF40-206ENST00000564260 ABCA12Q86UK0 2595 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 IQCMA0A1B0GVH7 501 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 A0A1W2PPL8 197 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 SNAP29O95721 258 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 GAAP10253 952 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 POU1F1P28069 291 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 ALDH3A2P51648 485 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 RAD23AP54725 363 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 NAAAQ02083 359 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 SGCAQ16586 387 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 SLC35F1Q5T1Q4 408 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 ALKBH2Q6NS38 261 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 UNQ6126/PRO20091Q6UXV3 157 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 ICA1LQ8NDH6 482 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 PIGTQ969N2 578 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 SH3GL3Q99963 347 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 SEMA6AQ9H2E6 1030 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 RPRD1BQ9NQG5 326 aaKnown RBP14.51□□□□□ -0.09
RNF40-206ENST00000564260 COA3Q9Y2R0 106 aaPredicted RBP14.51□□□□□ -0.09
RNF40-206ENST00000564260 SPEF1Q9Y4P9 236 aa14.51□□□□□ -0.09
RNF40-206ENST00000564260 ZNF503-AS2A6NEH8 195 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 VSTM5A8MXK1 200 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 SHISA9B4DS77 424 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 SURF4O15260 269 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 PRODHO43272 600 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 RAF1P04049 648 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 ALPLP05186 524 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 CDAP32320 146 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 IDH3GP51553 393 aaPredicted RBP14.5□□□□□ -0.09
RNF40-206ENST00000564260 CDH11P55287 796 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 DAG1Q14118 895 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 PTGES3Q15185 160 aaKnown RBP14.5□□□□□ -0.09
RNF40-206ENST00000564260 SLC22A25Q6T423 547 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 PIAS4Q8N2W9 510 aaPredicted RBP14.5□□□□□ -0.09
RNF40-206ENST00000564260 SLC26A10Q8NG04 563 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 MBD6Q96DN6 1003 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 PLEKHA8Q96JA3 519 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 RDH12Q96NR8 316 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 CIB1Q99828 191 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 ZNF416Q9BWM5 594 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 RNF121Q9H920 327 aa14.5□□□□□ -0.09
RNF40-206ENST00000564260 TMEFF2Q9UIK5 374 aaPredicted RBP14.5□□□□□ -0.09
RNF40-206ENST00000564260 NDRG4Q9ULP0 352 aaKnown RBP14.5□□□□□ -0.09
RNF40-206ENST00000564260 A0A1W2PPR1 153 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 ZAR1LA6NP61 321 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 ICMTO60725 284 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 IGFBP1P08833 259 aaPredicted RBP14.49□□□□□ -0.09
RNF40-206ENST00000564260 PCSK6P29122 969 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 RPS23P62266 143 aaKnown RBP14.49□□□□□ -0.09
RNF40-206ENST00000564260 NPRL3Q12980 569 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 CRMP1Q14194 572 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 ENDOGQ14249 297 aaKnown RBP14.49□□□□□ -0.09
RNF40-206ENST00000564260 ETFDHQ16134 617 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 TBC1D28Q2M2D7 210 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 SLC35D3Q5M8T2 416 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 SLX4IPQ5VYV7 408 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 ACSM5Q6NUN0 579 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 LRRC18Q8N456 261 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 PROKR2Q8NFJ6 384 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 GJC3Q8NFK1 279 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 OR10H5Q8NGA6 315 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 AKAP1Q92667 903 aaKnown RBP eCLIP14.49□□□□□ -0.09
RNF40-206ENST00000564260 FBXO17Q96EF6 278 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 DHRS9Q9BPW9 319 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 ZNF442Q9H7R0 627 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 SRA1Q9HD15 236 aaKnown RBP14.49□□□□□ -0.09
RNF40-206ENST00000564260 ST6GALNAC2Q9UJ37 374 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 POU2F3Q9UKI9 436 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 ABCA4P78363 2273 aa14.49□□□□□ -0.09
RNF40-206ENST00000564260 NOTCH2Q04721 2471 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 IGHV2OR16-5A0A0B4J2B6 119 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 SAC3D1A6NKF1 404 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 PRR23D1E9PI22 279 aaPredicted RBP14.48□□□□□ -0.09
RNF40-206ENST00000564260 J3QW42 95 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 DCTN6O00399 190 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 PRR23D2P0DMB1 279 aaPredicted RBP14.48□□□□□ -0.09
RNF40-206ENST00000564260 ZNF35P13682 527 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 ZNF32P17041 273 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 SPI1P17947 270 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 TUBG1P23258 451 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 FMO3P31513 532 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 APLNRP35414 380 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 KRTAP10-9P60411 292 aa14.48□□□□□ -0.09
RNF40-206ENST00000564260 TUBA1BP68363 451 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms