RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 RPL18Q07020 188 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 PUDPQ08623 228 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 RASGEF1BQ0VAM2 473 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 PMS2P3Q13401 168 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 TRIP10Q15642 601 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 TBCEQ15813 527 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 ZBED5Q49AG3 693 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 LRRK2Q5S007 2527 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF362Q5T0B9 420 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OGFRL1Q5TC84 451 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 LPCAT4Q643R3 524 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 KDM4DQ6B0I6 523 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 GPR139Q6DWJ6 353 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 DGAT2L7PQ6IED9 249 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 SMARCD3Q6STE5 483 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 KLHL24Q6TFL4 600 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 CREB3L2Q70SY1 520 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 CHMP1BQ7LBR1 199 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 RRM2BQ7LG56 351 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 FAM122BQ7Z309 247 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 NUFIP2Q7Z417 695 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 P4HA3Q7Z4N8 544 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OAFQ86UD1 273 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 IGFN1Q86VF2 1251 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 TUSC5Q8IXB3 177 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 CDK20Q8IZL9 346 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 GCNT2Q8N0V5 402 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 SLC43A2Q8N370 569 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 PARP8Q8N3A8 854 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 CBR4Q8N4T8 237 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OR8H1Q8NGG4 311 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OR4Q3Q8NH05 313 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OR51A7Q8NH64 312 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 FANK1Q8TC84 345 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 TXNDC15Q96J42 360 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 SAMD8Q96LT4 415 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OXGR1Q96P68 337 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF385AQ96PM9 386 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 GPX7Q96SL4 187 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 VKORC1Q9BQB6 163 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 SF3B5Q9BWJ5 86 aaKnown RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OSBPL10Q9BXB5 764 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 PLA2G12AQ9BZM1 189 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 UCK2Q9BZX2 261 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 OR52D1Q9H346 318 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 EGLN3Q9H6Z9 239 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 KRCC1Q9NPI7 259 aaPredicted RBP4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 USE1Q9NZ43 259 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 KLHL9Q9P2J3 617 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 IL20RAQ9UHF4 553 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 CDH10Q9Y6N8 788 aa4.59□□□□□ -1.67
HERPUD1-207ENST00000563781 FREM3P0C091 2139 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 KIAA1549Q9HCM3 1950 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 HECTD1Q9ULT8 2610 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 BLOC1S5-TXNDC5H3BN57 136 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 RAB27BO00194 218 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 CCL21O00585 134 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 BHLHE40O14503 412 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 LRRTM2O43300 516 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 RNF13O43567 381 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 OR6A2O95222 327 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 TXNDC12O95881 172 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 PLGP00747 810 aaPredicted RBP4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 CGAP01215 116 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 IGHMP01871 453 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 HIST1H2ABP04908 130 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 CRHP06850 196 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 YES1P07947 543 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 CD14P08571 375 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 TMIGD3P0DMS9 266 aaPredicted RBP4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 APEHP13798 732 aaKnown RBP4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 PLA2G2AP14555 144 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 ZNF43P17038 809 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 GSTM3P21266 225 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 AHCYP23526 432 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 IGFBP5P24593 272 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 EPHA2P29317 976 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 POLR2IP36954 125 aaKnown RBP4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 SELENOPP49908 381 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 ALDH3A2P51648 485 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 ERVK-25P63136 954 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 SIRPAP78324 504 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 POU3F1Q03052 451 aaPredicted RBP4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 RUNX1T1Q06455 604 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 SRSF1Q07955 248 aaKnown RBP eCLIP4.58□□□□□ -1.685e-17■■■■■ 53
HERPUD1-207ENST00000563781 PMPCAQ10713 525 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 COX10Q12887 443 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 MELKQ14680 651 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 RNPS1Q15287 305 aaKnown RBP4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 SF3B4Q15427 424 aaKnown RBP eCLIP4.58□□□□□ -1.684e-9■■■■■ 31.2
HERPUD1-207ENST00000563781 ACKR1Q16570 336 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 PGGHGQ32M88 737 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 RFX4Q33E94 735 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 ANKDD1AQ495B1 522 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 SLC36A3Q495N2 470 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 ALG10Q5BKT4 473 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 ARMC4Q5T2S8 1044 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 EEF1A1P5Q5VTE0 462 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 TMEM225Q6GV28 225 aa4.58□□□□□ -1.68
HERPUD1-207ENST00000563781 OR2A2Q6IF42 318 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms