RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 SOX30O94993 753 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TNFAIP8O95379 198 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 IFNA6P05013 189 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 KLK1P06870 262 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 HBQ1P09105 142 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 SMIM10L1P0DMW3 83 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 FGF3P11487 239 aaPredicted RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 HLA-GP17693 338 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TCP1P17987 556 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 G0S2P27469 103 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 CALCRP30988 508 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 IFNA8P32881 189 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 RBM34P42696 430 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 PLK1P53350 603 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 VSNL1P62760 191 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 PAX2Q02962 417 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TFF2Q03403 129 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 BNIP2Q12982 314 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 UAP1Q16222 522 aaPredicted RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 HAGHQ16775 308 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 NDUFAF6Q330K2 333 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 PAN3Q58A45 887 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TFDP3Q5H9I0 405 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 LY6G5CQ5SRR4 150 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 DDI2Q5TDH0 399 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 C1orf189Q5VU69 101 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 PRSS57Q6UWY2 283 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 LINC00336Q6ZUF6 198 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 C9orf139Q6ZV77 190 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 ASB18Q6ZVZ8 466 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 ABHD13Q7L211 337 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 METTL4Q8N3J2 472 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 ZNF843Q8N446 348 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 DHRSXQ8N5I4 330 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 NOXO1Q8NFA2 376 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 OR10V1Q8NGI7 309 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 OR5D18Q8NGL1 313 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 SETD7Q8WTS6 366 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 OR8D1Q8WZ84 308 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 FGF14Q92915 247 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TCEAL4Q96EI5 215 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 SDSLQ96GA7 329 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 SMIM10Q96HG1 83 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 NEURL2Q9BR09 285 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 ACTR3CQ9C0K3 210 aaPredicted RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 OR51B6Q9H340 312 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 DHX35Q9H5Z1 703 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 PLEKHA1Q9HB21 404 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 AGPAT4Q9NRZ5 378 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 FOXJ2Q9P0K8 574 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 ERVW-1Q9UQF0 538 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TCF19Q9Y242 345 aa4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 MRPS28Q9Y2Q9 187 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 YARS2Q9Y2Z4 477 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TBL2Q9Y4P3 447 aaKnown RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 TNRC18O15417 2968 aaPredicted RBP4.45□□□□□ -1.7
VPS35P1-201ENST00000563400 MYH10P35580 1976 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 TMEM213A2RRL7 107 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 LILRA5A6NI73 299 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 BLOC1S5-TXNDC5H3BN57 136 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 MGST3O14880 152 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 SIGLEC5O15389 551 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 SYNGR3O43761 229 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 IGLV3-27P01718 113 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 ATP1A1P05023 1023 aaKnown RBP4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 PRKCGP05129 697 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 CTRB1P17538 263 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 RPL4P36578 427 aaKnown RBP4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 FEN1P39748 380 aaKnown RBP4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 HSPA13P48723 471 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 KLK7P49862 253 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 GNG10P50151 68 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 SERPINB9P50453 376 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 REEP5Q00765 189 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 ZNF235Q14590 738 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 WASHC2DQ5SRD0 308 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 MARC1Q5VT66 337 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 CTRB2Q6GPI1 263 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 TAC4Q86UU9 113 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 BBS7Q8IWZ6 715 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 LSMEM2Q8N112 164 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 FAM89BQ8N5H3 189 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 ATPAF2Q8N5M1 289 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 DCAF4L2Q8NA75 395 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 NECAP1Q8NC96 275 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 SLC37A3Q8NCC5 494 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 TSTD1Q8NFU3 115 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 OR2L2Q8NH16 312 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 ENKURQ8TC29 256 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 MAGEC3Q8TD91 643 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 RPEQ96AT9 228 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 NSMCE3Q96MG7 304 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 ZFP3Q96NJ6 502 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 NIPSNAP3BQ9BS92 247 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 CSTL1Q9H114 145 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 SYT4Q9H2B2 425 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 OR51V1Q9H2C8 321 aa4.44□□□□□ -1.7
VPS35P1-201ENST00000563400 TMPRSS5Q9H3S3 457 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms