RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 ZNF793Q6ZN11 406 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 VRK2Q86Y07 508 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 OR4K14Q8NGD5 310 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 OR52L1Q8NGH7 329 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 ZG16BQ96DA0 208 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 TGM7Q96PF1 710 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 DPH1Q9BZG8 443 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 RHBGQ9H310 441 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 NCDNQ9UBB6 729 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 LPAR3Q9UBY5 353 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SLC17A4Q9Y2C5 497 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 C7orf77A4D0Y5 90 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 ITGB2P05107 769 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 C8orf89P0DMQ9 161 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 LTBRP36941 435 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 BCL6P41182 706 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SNRPNP63162 240 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 REEP5Q00765 189 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 DHRS2Q13268 280 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 USF2Q15853 346 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 AWAT1Q58HT5 328 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 PRAMEF17Q5VTA0 474 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 DNM1P46Q6ZS02 220 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 MBOAT2Q6ZWT7 520 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SFTPA2Q8IWL1 248 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 GJD3Q8N144 294 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 ARL14Q8N4G2 192 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 OR5T3Q8NGG3 340 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SUN3Q8TAQ9 357 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 RGP1Q92546 391 aaPredicted RBP12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 C20orf24Q9BUV8 137 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SUCNR1Q9BXA5 334 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 NRSN2Q9GZP1 204 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 SEMA6CQ9H3T2 930 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 ZCCHC3Q9NUD5 404 aaKnown RBP12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 PIAS3Q9Y6X2 628 aa12.72□□□□□ -0.37
GTF3C1-203ENST00000562609 COL6A3P12111 3177 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 F8VVB4 439 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 F8VWA3 439 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 BLOC1S5-TXNDC5H3BN57 136 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 ERAL1O75616 437 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 PMP2P02689 132 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 THY1P04216 161 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 CD14P08571 375 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 LIPCP11150 499 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 PEBP1P30086 187 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 TNFRSF4P43489 277 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 CDX1P47902 265 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 GSK3AP49840 483 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 FXYD6P3P58550 94 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 FUT5Q11128 374 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 ANKRD39Q53RE8 183 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 NSUN5P2Q63ZY6 315 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 TMEM92Q6UXU6 159 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 OR1E3Q8WZA6 343 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 EDAQ92838 391 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 FN3KRPQ9HA64 309 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 PELI2Q9HAT8 420 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 WSB2Q9NYS7 404 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 TRIOBPQ9H2D6 2365 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 SPTBP11277 2137 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 PRSS38A1L453 326 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 FAM86C2PA6NEL3 165 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 H7C1Q1 480 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 BHLHE40O14503 412 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 ZNF208O43345 1280 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 ERI3O43414 337 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 ARG1P05089 322 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 CALCBP10092 127 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 BMP7P18075 431 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 KIAA0141Q14154 515 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 STEAP1BQ6NZ63 245 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 GDF7Q7Z4P5 450 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 PPP1R3BQ86XI6 285 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 PAQR4Q8N4S7 273 aaPredicted RBP12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 UBAC2Q8NBM4 344 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 OR10D4PQ8NGN7 298 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 MRGPRX1Q96LB2 322 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 UPB1Q9UBR1 384 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 GNG8Q9UK08 70 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 CBY1Q9Y3M2 126 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 TIMM10BQ9Y5J6 103 aa12.71□□□□□ -0.37
GTF3C1-203ENST00000562609 M0R036 132 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 MFNGO00587 321 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 OR10H2O60403 315 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 NR2C1P13056 603 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 PCBP4P57723 403 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 ACTC1P68032 377 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 ACTA1P68133 377 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 SRSF4Q08170 494 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 AGERQ15109 404 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 RSU1Q15404 277 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 LPCAT3Q6P1A2 487 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 GABRG3Q99928 467 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 BCL2L10Q9HD36 194 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 PARPBPQ9NWS1 579 aa12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 TNRC18O15417 2968 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-203ENST00000562609 UNC119BA6NIH7 251 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms