RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 RPS6KA3P51812 740 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 ZNF133P52736 654 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-204ENST00000561065 MRPS34P82930 218 aaKnown RBP13.72□□□□□ -0.21
LMX1B-204ENST00000561065 FMODQ06828 376 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 TOP3AQ13472 1001 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-204ENST00000561065 MAD2L1BPQ15013 274 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-204ENST00000561065 DNAL1Q4LDG9 190 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 ZDHHC21Q8IVQ6 265 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 OR52J3Q8NH60 311 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 HDAC2Q92769 488 aaKnown RBP13.72□□□□□ -0.21
LMX1B-204ENST00000561065 RAB1BQ9H0U4 201 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 MAGIXQ9H6Y5 334 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 GPR160Q9UJ42 338 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 UGT2A1Q9Y4X1 527 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 V9GYQ6 96 aa13.72□□□□□ -0.21
LMX1B-204ENST00000561065 TRAV27A0A087WT01 109 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 LYNX1G3V0Z9 82 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 GYG2O15488 501 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 OR10H3O60404 316 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 MMP7P09237 267 aaPredicted RBP13.71□□□□□ -0.21
LMX1B-204ENST00000561065 LYNX1P0DP58 116 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 CCL2P13500 99 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 IGFBP5P24593 272 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 GIFP27352 417 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 GPR4P46093 362 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 HSF2Q03933 536 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 FHL1Q13642 323 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 SGCAQ16586 387 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 CHRFAM7AQ494W8 412 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 CYB5R2Q6BCY4 276 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 DPY19L2P2Q6ZN68 376 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 C1orf174Q8IYL3 243 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 CLDN22Q8N7P3 220 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 NABP1Q96AH0 204 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 MSI2Q96DH6 328 aaKnown RBP13.71□□□□□ -0.21
LMX1B-204ENST00000561065 FAM46AQ96IP4 442 aaKnown RBP13.71□□□□□ -0.21
LMX1B-204ENST00000561065 DHRS1Q96LJ7 313 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 KCNK17Q96T54 332 aa13.71□□□□□ -0.21
LMX1B-204ENST00000561065 LRP5LA4QPB2 252 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 UNC119BA6NIH7 251 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 PTP4A3O75365 173 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 APEHP13798 732 aaKnown RBP13.7□□□□□ -0.22
LMX1B-204ENST00000561065 IL2RGP31785 369 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 CDAP32320 146 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 RAD52P43351 418 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 ALDH3B1P43353 468 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 EVX1P49640 407 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 ERVS71-1P61550 626 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 TRAP1Q12931 704 aaKnown RBP13.7□□□□□ -0.22
LMX1B-204ENST00000561065 GK3PQ14409 553 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 MOGQ16653 247 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 TBC1D28Q2M2D7 210 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 SMARCD3Q6STE5 483 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 CXXC5Q7LFL8 322 aaKnown RBP13.7□□□□□ -0.22
LMX1B-204ENST00000561065 TSEN54Q7Z6J9 526 aaKnown RBP13.7□□□□□ -0.22
LMX1B-204ENST00000561065 IGFN1Q86VF2 1251 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 LRRC75AQ8NAA5 344 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 SLC30A7Q8NEW0 376 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 OR13C2Q8NGS9 318 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 NEU4Q8WWR8 484 aaPredicted RBP13.7□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF570Q96NI8 536 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 CDH20Q9HBT6 801 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 TMEM160Q9NX00 188 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 EIF3KQ9UBQ5 218 aaKnown RBP13.7□□□□□ -0.22
LMX1B-204ENST00000561065 SLC7A8Q9UHI5 535 aa13.7□□□□□ -0.22
LMX1B-204ENST00000561065 C12orf71A8MTZ7 269 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 M0R233 179 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 SYNGR3O43761 229 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 IDH3BO43837 385 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 LILRA1O75019 489 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 NCR1O76036 304 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 FAM157BP0CG42 384 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF23P17027 643 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 SDHAP31040 664 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 APLNRP35414 380 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 OMPP47874 163 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 GZMKP49863 264 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 HMGA2P52926 109 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ERVK-25P63136 954 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 RIN1Q13671 783 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 TRIP10Q15642 601 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ELFN2Q5R3F8 820 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 FAM27BQ5VT28 67 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 LCN8Q6JVE9 175 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 RPL13AP3Q6NVV1 102 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 DNM1P34Q6PK57 102 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ARL9Q6T311 187 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 CYP2R1Q6VVX0 501 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 RINLQ6ZS11 566 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 IL17RELQ6ZVW7 336 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 SYT9Q86SS6 491 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ADCK1Q86TW2 530 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ZNF786Q8N393 782 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 FAM86B1Q8N7N1 296 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 GNPDA2Q8TDQ7 276 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 NSMAFQ92636 917 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 ASB9Q96DX5 294 aa13.69□□□□□ -0.22
LMX1B-204ENST00000561065 RSRC1Q96IZ7 334 aaKnown RBP13.69□□□□□ -0.22
LMX1B-204ENST00000561065 TSPAN32Q96QS1 320 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms