RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 FBXL3Q9UKT7 428 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 CDH10Q9Y6N8 788 aa13.2□□□□□ -0.3
SNRPA1-213ENST00000560856 TMEM129A0AVI4 362 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 DCTN6O00399 190 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 BHLHE40O14503 412 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 IDH3BO43837 385 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 FKBP6O75344 327 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 CST2P09228 141 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 HIST1H1CP16403 213 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 ZNF32P17041 273 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 THBS4P35443 961 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 ATP5J2P56134 94 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 DBPQ10586 325 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 ZNF362Q5T0B9 420 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 UGT2A3Q6UWM9 527 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 CD300LDQ6UXZ3 194 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 PAQR4Q8N4S7 273 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 CPEB3Q8NE35 698 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 SNX18Q96RF0 628 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 IFT27Q9BW83 186 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 CACNG6Q9BXT2 260 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 NUAK2Q9H093 628 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 NTN4Q9HB63 628 aa13.19□□□□□ -0.3
SNRPA1-213ENST00000560856 IGLV1-36A0A0B4J1U3 117 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 A0A1W2PPL8 197 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 ARRDC5A6NEK1 342 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 SLC16A7O60669 478 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 KHDRBS3O75525 346 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 IGHV4-39P01824 125 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 OR4A8P0C604 315 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 MSR1P21757 451 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 SERPINF1P36955 418 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 CBX1P83916 185 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 PSG4Q00888 419 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 DAG1Q14118 895 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 EFNB3Q15768 340 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 PABPC1L2AQ5JQF8 200 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 YTHDF3Q7Z739 585 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 OR10G2Q8NGC3 310 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 OR4K13Q8NH42 304 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 FOXN4Q96NZ1 517 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 TSSK2Q96PF2 358 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 FEVQ99581 238 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 NIPSNAP1Q9BPW8 284 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 ZNF416Q9BWM5 594 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 WNT5BQ9H1J7 359 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 RNF121Q9H920 327 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 EMC7Q9NPA0 242 aa13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 GDF2Q9UK05 429 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 COA3Q9Y2R0 106 aaPredicted RBP13.18□□□□□ -0.3
SNRPA1-213ENST00000560856 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 H7C417 338 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 GPRIN2O60269 458 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 MPZL1O95297 269 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 CCL2P13500 99 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 GLRXP35754 106 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 SNTB2Q13425 540 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 CCNIQ14094 377 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 KCNMB1Q16558 191 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 CLEC12AQ5QGZ9 265 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 OTPQ5XKR4 325 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 KRT80Q6KB66 452 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 RPL13AP3Q6NVV1 102 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 LEG1Q6P5S2 330 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 VHLLQ6RSH7 139 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 DNM1P46Q6ZS02 220 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 SYT9Q86SS6 491 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 HS3ST5Q8IZT8 346 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 OR6V1Q8N148 313 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 NPEPL1Q8NDH3 523 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 AKR7LQ8NHP1 331 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 DUS3LQ96G46 650 aaKnown RBP13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 DOK1Q99704 481 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 OR2H1Q9GZK4 316 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 PLK3Q9H4B4 646 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 DNAJB9Q9UBS3 223 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 B9D1Q9UPM9 204 aa13.17□□□□□ -0.3
SNRPA1-213ENST00000560856 LOC100509620A0A075B734 347 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 B9A039 149 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 SNAP29O95721 258 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 GPANK1O95872 356 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 GAAP10253 952 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 CD99P14209 185 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 GSTM3P21266 225 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 COX10Q12887 443 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 SLC35F1Q5T1Q4 408 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 ZBTB46Q86UZ6 589 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 GLB1L2Q8IW92 636 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 LNX2Q8N448 690 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 POM121L2Q96KW2 1035 aa13.16□□□□□ -0.3
SNRPA1-213ENST00000560856 Q96MF0 132 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms