RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 ACTG2P63267 376 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 ACTC1P68032 377 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 ARG2P78540 354 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 ERCC8Q13216 396 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 GINS1Q14691 196 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 C9orf135Q5VTT2 229 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 SPECC1LQ69YQ0 1117 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 SLC8B1Q6J4K2 584 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 METAP1DQ6UB28 335 aaPredicted RBP2.27□□□□□ -2.05
USP8-211ENST00000560527 BIVMQ86UB2 503 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 OR10G2Q8NGC3 310 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 OR10J6PQ8NGY7 276 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 ACMSDQ8TDX5 336 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 SERPINB12Q96P63 405 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 CTNNA3Q9UI47 895 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 RRP15Q9Y3B9 282 aaKnown RBP2.27□□□□□ -2.05
USP8-211ENST00000560527 KCNE3Q9Y6H6 103 aa2.27□□□□□ -2.05
USP8-211ENST00000560527 IGLV1-50A0A075B6I6 118 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 IGHV5-10-1A0A0J9YXX1 117 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 ZNF816-ZNF321PA0A0X1KG74 233 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 CIB4A0PJX0 185 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 LRRIQ3A6PVS8 624 aaPredicted RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 CLOCKO15516 846 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 RP2O75695 350 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 SLC25A14O95258 325 aaPredicted RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 CLIC3O95833 236 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 KRT14P02533 472 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 HLA-DPB1P04440 258 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 FABP3P05413 133 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 IGHV1-8P0DP01 117 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 PRPS2P11908 318 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 PSMC3P17980 439 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 PGAM1P18669 254 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 F2RP25116 425 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 RRM2P31350 389 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 CSNK1A1P48729 337 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 TMED10P49755 219 aaKnown RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 SLC25A11Q02978 314 aaKnown RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 MXD1Q05195 221 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 SLAQ13239 276 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 CCDC183Q5T5S1 534 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 IQCKQ8N0W5 287 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 PGAM4Q8N0Y7 254 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 CNPY4Q8N129 248 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 GTPBP8Q8N3Z3 284 aaPredicted RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 OR2A1Q8NGT9 310 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 OR2L8Q8NGY9 312 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 RNF139Q8WU17 664 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 ABHD3Q8WU67 409 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 CNDP1Q96KN2 507 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 TGS1Q96RS0 853 aaKnown RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 NDFIP1Q9BT67 221 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 SLC25A2Q9BXI2 301 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 OR51M1Q9H341 326 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 FAM49BQ9NUQ9 324 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 GPATCH2LQ9NWQ4 482 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 UXTQ9UBK9 157 aaPredicted RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 TMED5Q9Y3A6 229 aa2.26□□□□□ -2.05
USP8-211ENST00000560527 MRPS18BQ9Y676 258 aaKnown RBP2.26□□□□□ -2.05
USP8-211ENST00000560527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.25□□□□□ -2.05
USP8-211ENST00000560527 DENND4AQ7Z401 1863 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 SIRPB1O00241 398 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 NDUFAB1O14561 156 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 AIM2O14862 343 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 RNF13O43567 381 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 KLHL41O60662 606 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 DPM1O60762 260 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 ENTPD5O75356 428 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 CTDNEP1O95476 244 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 AGTP01019 485 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 ZNF250P15622 560 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 WARSP23381 471 aaKnown RBP2.25□□□□□ -2.05
USP8-211ENST00000560527 GPX4P36969 197 aaPredicted RBP2.25□□□□□ -2.05
USP8-211ENST00000560527 CEACAM6P40199 344 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 SLC1A1P43005 524 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 ZNF138P52744 262 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 RAB10P61026 200 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 SRSF5Q13243 272 aaKnown RBP2.25□□□□□ -2.05
USP8-211ENST00000560527 PGGHGQ32M88 737 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 C5orf47Q569G3 176 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 CARD17Q5XLA6 110 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 MMAAQ8IVH4 418 aaKnown RBP2.25□□□□□ -2.05
USP8-211ENST00000560527 OR5W2Q8NH69 310 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 ZNF502Q8TBZ5 544 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 SLC7A13Q8TCU3 470 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 KIFAP3Q92845 792 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 GALNT14Q96FL9 552 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 ZNF681Q96N22 645 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 SLC29A1Q99808 456 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 UBE2ZQ9H832 354 aaPredicted RBP2.25□□□□□ -2.05
USP8-211ENST00000560527 HMG20AQ9NP66 347 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 SAMSN1Q9NSI8 373 aaKnown RBP2.25□□□□□ -2.05
USP8-211ENST00000560527 LGALS13Q9UHV8 139 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
USP8-211ENST00000560527 SLIT3O75094 1523 aa2.25□□□□□ -2.05
USP8-211ENST00000560527 A0A1W2PP18 115 aa2.24□□□□□ -2.05
USP8-211ENST00000560527 TRIM64CA6NLI5 447 aa2.24□□□□□ -2.05
USP8-211ENST00000560527 B4GALT5O43286 388 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms