RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TEX30Q5JUR7 227 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 HIST2H3PS2Q5TEC6 136 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 STAC2Q6ZMT1 411 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 HIST2H3AQ71DI3 136 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 ATCAYQ86WG3 371 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 GID4Q8IVV7 300 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 GLB1L2Q8IW92 636 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 GPR137CQ8N3F9 429 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 BPIFB6Q8NFQ5 453 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 OR4F15Q8NGB8 312 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 LILRB4Q8NHJ6 448 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 C11orf40Q8WZ69 217 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 BCL2L2Q92843 193 aaPredicted RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 OTULINQ96BN8 352 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 Q96MT0 163 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 FOXB1Q99853 325 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 RBM24Q9BX46 236 aaKnown RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 Q9H521 79 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 FGF20Q9NP95 211 aaPredicted RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 POLE4Q9NR33 117 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 TMEM38BQ9NVV0 291 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 WARS2Q9UGM6 360 aaKnown RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 ERRFI1Q9UJM3 462 aaPredicted RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 PROCRQ9UNN8 238 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 COPS3Q9UNS2 423 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 LRCH1Q9Y2L9 728 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 PRR14LQ5THK1 2151 aa8.22□□□□□ -1.09
HERC1-206ENST00000559996 RP1L1Q8IWN7 2480 aaPredicted RBP8.22□□□□□ -1.09
HERC1-206ENST00000559996 RTTNQ86VV8 2226 aa8.21□□□□□ -1.09
HERC1-206ENST00000559996 CHD6Q8TD26 2715 aa8.21□□□□□ -1.09
HERC1-206ENST00000559996 WIPF3A6NGB9 483 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SLC22A31A6NKX4 558 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 PYCARD-AS1I3L0S3 204 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 ZNF593O00488 134 aaPredicted RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 SELENOFO60613 162 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
HERC1-206ENST00000559996 SEC14L2O76054 403 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 APOL3O95236 402 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 MMP7P09237 267 aaPredicted RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 BMP5P22003 454 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 C21orf33P30042 268 aaPredicted RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 RPS27P42677 84 aaKnown RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 MTNR1AP48039 350 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 CASP6P55212 293 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 CSNK2BP67870 215 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 TFF3Q07654 80 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 FAM27E3Q08E93 113 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 TSC22D1Q15714 1073 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 RSPO1Q2MKA7 263 aaPredicted RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 RBM48Q5RL73 367 aaKnown RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 SFRP5Q5T4F7 317 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 ZNF684Q5T5D7 378 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 FAM27BQ5VT28 67 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 C9orf135Q5VTT2 229 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 BEND4Q6ZU67 534 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SHFQ7M4L6 423 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SSX6Q7RTT6 188 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 MRGPRGQ86SM5 289 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 CXorf67Q86X51 503 aaPredicted RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 CDC20BQ86Y33 519 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SKA3Q8IX90 412 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SLC22A24Q8N4F4 322 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 RFLNBQ8N5W9 214 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 WDR31Q8NA23 367 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 PROKR2Q8NFJ6 384 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 OR52I1Q8NGK6 324 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 OR10S1Q8NGN2 331 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 OR1K1Q8NGR3 316 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 ITLN2Q8WWU7 325 aaPredicted RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 FBXO17Q96EF6 278 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 RNFT2Q96EX2 444 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 AMELYQ99218 206 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SH3GL3Q99963 347 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 ZNF416Q9BWM5 594 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 YTHDF1Q9BYJ9 559 aaKnown RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 PIGMQ9H3S5 423 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 RERGLQ9H628 205 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 SIAEQ9HAT2 523 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 EMC7Q9NPA0 242 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 B3GNT2Q9NY97 397 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 H2AFY2Q9P0M6 372 aaPredicted RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 UPB1Q9UBR1 384 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 CYB5R1Q9UHQ9 305 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.21□□□□□ -1.1
HERC1-206ENST00000559996 KLHDC2Q9Y2U9 406 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 RPL36Q9Y3U8 105 aaKnown RBP8.21□□□□□ -1.1
HERC1-206ENST00000559996 LHFPL6Q9Y693 200 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 COMMD3-BMI1R4GMX3 469 aa8.21□□□□□ -1.1
HERC1-206ENST00000559996 CACNA1CQ13936 2221 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 ZNF587BE7ETH6 402 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 WNT11O96014 354 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 IGHA1P01876 353 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 MRPL3P09001 348 aaKnown RBP8.2□□□□□ -1.1
HERC1-206ENST00000559996 PATE4P0C8F1 98 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 RNF224P0DH78 156 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 PIPP12273 146 aaPredicted RBP8.2□□□□□ -1.1
HERC1-206ENST00000559996 ALOX5APP20292 161 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 CENPAP49450 140 aa8.2□□□□□ -1.1
HERC1-206ENST00000559996 LSM6P62312 80 aaKnown RBP8.2□□□□□ -1.1
HERC1-206ENST00000559996 ZNF85Q03923 595 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms